Zygotorulaspora mrakii: HG535_0G02970
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Entry
HG535_0G02970 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HG535_0G02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zmk03400
]
HG535_0G02970
Enzymes [BR:
zmk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
HG535_0G02970
DNA repair and recombination proteins [BR:
zmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
HG535_0G02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
59238197
NCBI-ProteinID:
XP_037146139
LinkDB
All DBs
Position
7:556830..559706
Genome browser
AA seq
958 aa
AA seq
DB search
MEQLAPQAEACLEGPKNFSPSPDFVWLCEELFKKLDNVQIERKQHYSGSKPVSVRYYEVI
NNFVNLWRSTVGTDIFPALVLILPYRDKRIYNIKDYTLVKAICRYLKLPKNSVTERRLLR
WKKKASRGIRLSDFCVEEIKKRKRESSKKCRITIDKLNEFLDKLAEERGTKGRGYVGVIE
STAFKYCLENMSYMELKYLFDIILKSRVIGGQEHKFLNCWHPDAEDYLSVVSDLKLVASK
LWDPNFRLKNDDLSVNIGYAFVPHLAKKLSISYDKICKKLAYDFYIEEKMDGERIQLHYQ
DYGMKLKFYSRRGFDYTYLYGESIKGGTISPFLKLTKNVKECVLDGEMVTFDLERNTVLP
FGLVKSSAKNALSPEGICTSGYRPLFMVLDLIYLNGISITKLPLHQRKVYLRQILTPHPN
IVNILPYIRCSDSESIKKSLQTAITMGSEGIILKRYNSKYSFGARNDNWLKVKPEYLEQF
GENMDLLVIGRTPGKKDSLMCGLAVFEEEEISDAMREMQQIVNLDTDSEDIEEEHERKKK
IKGFVSFCVIANGISQEEFKEIDRRTRGFWKKTEEINPPPLLKFGTKVPEEWIEPQNSVV
LEIKARSLDNTESSGRKFKAGCTLYGGYCRGIRLDKDWTTAYSLSELYQERRSKSSAYGQ
SAKQTLLKPKRARKSNIALSIGMKLDDDEAYKRNLDIFRGLYFYILSDCVDIWSKRRITK
EQLGAYVVQNGGVLINNLINKHNTESSYRIISSRCTTECNLLAERGYDIINPRWILDCIS
YETLVKIEPRHCYKVSNDLMKVAKCRADNLGDSYEIFVSQNGLDSLIDFAVSFDNMKEVK
FHTDSEIQKIPLFLLSGRVVYVPPIPYSEDEVTNGIIDRIKAFGGKTTQNISSCNLIITP
DANAEEKASIIKKIRLELSFLDENSGYPPKIPFIVAGEWLFKSIENGFQLPEEDFGVF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttggcacctcaagctgaggcatgtttggaaggaccgaagaatttttcaccg
tccccagacttcgtgtggctttgtgaagaactattcaaaaagcttgataatgtacaaata
gagcgcaaacaacactacagcggttccaagcctgtatcagtgcgatactatgaggtaata
aacaactttgtcaatttatggaggagcacagttggtactgatattttccctgctctcgta
cttatattaccttatcgggacaaaaggatttacaacataaaggattacactcttgtaaag
gctatctgcaggtacttgaagcttccgaaaaattcagtgacagagaggagactgcttaga
tggaagaaaaaagcttcaagaggtattagactgtctgatttctgtgtggaagagattaaa
aagagaaagcgggaatctagcaagaaatgtcgtatcacaatcgataaacttaatgaattc
ctagacaaacttgctgaagagcgtggcactaaaggaagaggttacgtgggagtgattgaa
tctactgcattcaaatattgtttagaaaatatgtcttatatggagctcaagtatctcttt
gatattattttaaaaagtagagtaattggagggcaggagcataagtttttaaattgttgg
catccagacgcggaagattacctcagtgtcgtatctgacttaaaacttgtggcaagcaaa
ctttgggatcctaattttcgtttgaaaaatgatgacttgagcgttaatataggatatgct
ttcgtgcctcatttggccaaaaaactctcgatctcctacgacaaaatttgcaaaaaattg
gcttatgacttctatatagaggaaaaaatggatggcgaacgaatccaattacattaccag
gattacggcatgaaactcaaattttatagccgccgtggatttgactatacgtacctttac
ggtgaaagcataaaaggaggaacaatttcccctttcttgaagcttactaaaaatgtgaaa
gaatgtgtgctggatggcgaaatggtaacttttgaccttgaacgcaatactgtgttacct
tttggattagttaaaagtagtgccaaaaacgctttgagtcccgaaggaatctgcacatct
ggctataggcccctttttatggtacttgatctgatatatcttaatggtataagcattacc
aaactaccgttgcaccaacgtaaggtttatttacgtcagatattaacaccgcatccaaac
attgtgaatattcttccatatatccgatgctctgattcagaatcaattaaaaaatctctt
cagactgccataacaatgggatcagaaggaataattctcaagcgatataattcaaaatat
agcttcggagctcgaaatgataattggctaaaggtaaaacctgaatatctagagcagttt
ggtgaaaacatggatttgcttgtaattggaagaacacctgggaagaaagactctctgatg
tgtggtttagctgtctttgaagaagaagaaatttccgatgcaatgagggaaatgcagcag
attgtcaatttggataccgattccgaagatatagaagaggaacacgaacggaagaagaag
atcaaaggatttgtttcgttctgtgttattgccaatggtatttctcaggaagaatttaag
gaaatcgacagaagaacgagaggattttggaaaaaaacagaagagattaatcctccacct
ttattgaaatttgggaccaaagtaccagaagaatggatcgagcctcaaaattctgtggtt
cttgaaattaaagcaagatctttagataatacggagtcaagtggaagaaaattcaaagct
ggttgtacgttatacggaggatactgtaggggaataagattagataaagattggactacc
gcatatagtttgtcggagctatatcaggagagaagaagcaaatctagtgcttacggacag
agtgctaaacagactcttctcaaaccaaaaagagcgcggaaaagtaatattgctctttcg
ataggaatgaagctagatgatgatgaagcttataagaggaatcttgacatatttcgaggg
ttgtatttttatatactatctgactgtgttgatatttggagtaaaagacgtataacgaaa
gagcaactgggagcttatgtagtgcagaatggaggcgtactaatcaacaatttgataaac
aaacacaatactgaaagtagctatcgcataatcagtagcaggtgtacgaccgaatgcaat
ttgttggctgaaagaggttacgatattattaatcctcgctggattttagattgtattagc
tatgaaaccctggttaagatagaaccgcgacattgttacaaagtatctaatgatttgatg
aaggtggcaaaatgcagggcggataatcttggcgacagctacgagatattcgtttcccaa
aacggattagacagccttatagatttcgcagttagcttcgataacatgaaagaagtcaaa
tttcatacagattctgaaatacaaaagattccactttttctgcttagtggcagagttgtt
tatgtccctccaataccttatagtgaggatgaggttaccaatggtataatagataggatt
aaggcatttgggggcaaaacgacccaaaatatctcatcatgtaatttaataataactccc
gatgccaatgctgaagagaaggctagtattatcaagaaaatacggttggaattatcgttt
ttggatgaaaatagtggctatcctccaaagattccatttattgttgctggagagtggctt
tttaagtcaattgaaaatggattccaattacctgaagaagacttcggggttttctga
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