Zootermopsis nevadensis (dampwood termite): 110831443
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Entry
110831443 CDS
T05136
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110831443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zne03400
]
110831443
Enzymes [BR:
zne01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
110831443
DNA repair and recombination proteins [BR:
zne03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
110831443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
BRCT_2
mRNA_cap_enzyme
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
110831443
NCBI-ProteinID:
XP_021923135
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MEYTVASKIHFKSLCRLCEIISDCARNKKEEYLKKYINYFHEYSKNLKQESPLLDDSFYP
FLRLLLPQLDRERGAYGIKEHNLAKVYIRVLGLPKEGHDASKLLNFRTPKTAGSGAGDFA
EVAFWVLKSRCPEGGNLSVEQINVHLDNIALKHAAHDPRGVDAELVAMLTSMSAAEQKWL
IRMLLKDMKLGLGQSRIFHIYHPDALELYDVSNSLLKVCQLLRDPNIRLHEVEVSLFSPF
RPMLAERCNVQTIEESMKKSQFYYVETKYDGERFQLHMENGVFKYFSRNGYEYTDVYVTL
LTSHVSKLLRADTKNCILDGEMMGWNKNLKCYKYKGTNFDVKCLKEGDCIRPCLCVFDVL
LYNGQVLTNKPLSERLHYLKNLFTPSEGIFMHAERKEVTTGQEVIHELNLAIDNRLEGIV
LKDPTSIYKPNMRKGGWYKIKPEYTEGLMDHLDLIIMGGYFGEGRRKGISHFLVGAAVPP
PIEDMEPVEFHSVARVGSGYSADELSELLQKLSLHWQRVTPGQCPPALVWTKEKPDVWIA
PQNSYILEVKASEIVQSSSYKVDYTLRFPRVETIRYDKKWSDCMTIIDFDSLRKEASGKL
YSRHVDASDQLSESPKKKVRQLKKIPITLGEQFCGIDVSEVNVTSNSLEAKVFCVLTGCQ
DHTKQDIETKIIQNGGTVVQNTGHNTFCALAGDSTLRVRNIAKSGQCSVARVDWLLRSIA
ANMLLPWTPADLLYATPTVSEQLSVEFDKFGDSYTQPLTEESLKYVLEQVEKSGCVMDLT
EEMLADLEIELFRGPSPYGLFRLCRSYVDKYFTLNDPLSGESKELDIVELDFSFYGGQVF
SHIDEQTTHVIIHSQSKDRLDEIKRINRARVCKFYIVTEQWVQKTVEMKNRQKENDYSL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggagtatactgttgcttctaaaatacatttcaagagtctgtgtcgtctctgtgagata
attagtgattgtgcacgtaataagaaggaagaatacctcaaaaaatacatcaactacttt
catgaatattccaagaatttaaaacaggaatcaccattattggatgacagtttttatccc
ttcctgagactactgctgccacaactagaccgagaacgtggtgcatatggcataaaggaa
cataacttggccaaggtctacattcgtgtccttggcctccctaaggaaggacatgatgca
tcaaaactactcaattttaggactcctaaaactgcaggcagcggtgcaggtgactttgcg
gaagtggctttctgggttctgaagagtcgttgtcctgaaggaggaaatctaagtgtggaa
caaataaatgttcatcttgataacatagcactgaagcatgcagctcatgacccaagagga
gttgatgctgagcttgttgcgatgctaacttctatgtctgcggcagaacagaagtggttg
atacggatgttgttaaaggacatgaagttgggcttgggtcagagccgtatttttcatata
tatcatccggatgccctggagctgtatgatgtttctaacagtcttcttaaggtgtgccag
ctgctacgcgatccaaacatccgtttgcatgaagtggaagtttcattgttctcaccattt
cgaccaatgctagcagaacgttgtaatgtgcaaactatagaagaatctatgaagaaaagt
cagttttattatgtagaaactaaatatgatggtgaaaggttccagttgcatatggaaaat
ggagtcttcaagtatttctcccggaatggttatgagtatacagatgtgtatgtcacactc
ctgacatctcatgtttcaaaattactgcgagctgatacaaagaattgcatactggatgga
gaaatgatgggctggaacaaaaatttgaaatgctataaatataaaggtaccaattttgat
gtcaagtgcttaaaggaaggggactgcattcgtccatgtttgtgtgtgtttgatgtcttg
ttgtataatggtcaagtactcaccaacaagccactgtctgagcgactccattatctaaag
aatctcttcacaccttctgaggggatcttcatgcatgcagaacgcaaggaagtaacaact
gggcaagaagtaatacatgaactaaacctggcaattgataacaggttagaaggaattgta
ctgaaggatccaacatcaatttacaaacctaacatgaggaaaggaggctggtataaaatc
aaacctgagtacacggaaggtttaatggaccatctggaccttattattatgggtggttac
tttggagaagggcggaggaagggtattagtcattttcttgttggagctgctgtgccgcca
cctattgaagatatggaaccagtggagtttcattctgtcgcacgtgtgggctcaggctac
tctgcggatgagttatcagaactactacagaagctgtcacttcactggcagcgtgtgact
ccaggtcagtgtccacctgctcttgtatggaccaaagaaaagccagatgtatggattgct
ccacaaaattcttatatactggaggttaaagcatccgagatcgtacagagctcttcatac
aaagttgactatacacttcgatttcctcgtgtcgaaactatccgctatgacaaaaagtgg
tctgactgcatgactatcatagattttgacagtttaaggaaggaggcatctgggaaactg
tactctagacatgttgatgccagtgatcagttgtcagaatcaccgaaaaagaaggtacgg
caactgaagaaaatacccattaccttaggtgaacagttttgtggtattgacgtatctgaa
gtcaatgtgacatcgaactcgttagaagcaaaggtgttttgtgtgttaactggctgtcaa
gatcatacaaaacaagacatagagaccaaaatcatacagaacggaggcacagttgtgcaa
aacacaggacataacacattctgtgctctggctggagactccacacttcgtgtgcgcaac
attgctaagagtggacagtgcagtgttgcccgtgtagactggcttctgcgctcaatagct
gctaatatgttattgccctggactcctgctgaccttttatatgcaacaccaacagtaagc
gaacagctctctgttgaatttgataagtttggagacagctacacgcaaccgctgactgaa
gagtcactgaagtatgttcttgaacaagttgaaaaaagtggttgtgttatggaccttact
gaagaaatgttagcagatcttgaaatagaactgtttcgtggacccagtccttatggcctc
ttccgtttgtgtcggtcatatgtggacaaatacttcacgttaaatgatcctttgtcaggt
gaaagcaaagagttggatattgtggaacttgactttagtttctatggaggtcaggttttt
tcacatatagatgagcagactacccatgtgattatacattctcagtcaaaggatagactt
gatgagattaaacgtatcaaccgagccagagtatgcaagttctacattgtcactgagcag
tgggttcagaagacagttgaaatgaagaacagacaaaaggagaatgattactcattgtaa
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