Zootermopsis nevadensis (dampwood termite): 110840641
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Entry
110840641 CDS
T05136
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zne03021
]
110840641
03036 Chromosome and associated proteins [BR:
zne03036
]
110840641
Transcription machinery [BR:
zne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110840641
Chromosome and associated proteins [BR:
zne03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110840641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SH2
S1
Tex_N
Spt6_S1
HHH_9
HHH_3
Tex_YqgF
HTH_10
Motif
Other DBs
NCBI-GeneID:
110840641
NCBI-ProteinID:
XP_021941499
LinkDB
All DBs
Position
Unknown
AA seq
1591 aa
AA seq
DB search
MDEDGYEEEEEEEDEYLDEEGEDAERRPRPKKTARKKATKKSIFEIYEPSELKRGHFTDL
DNEIRNTDIPERMQLRDFPVTAVPEGSDELDEEAEWIYKQAFCKPTISNQDGHGGADARD
RARKGPQTIGKIKKALDFMRNQHFEVPFIAFYRKEYVQPELNINDLWKVYKYDEKWCQLR
TRKMNLVTLFEKMRDYQAEQLMKEPDKPIPDGVRLLKDEDIDRLQAVQTTEELKDVHTHF
LLYYSHEVPEMQKAWRAKQREAAREARKNKHKHRVNAEGEEEEDREQPGQDEEIEPEDVE
DEPPENETVKQAVRSGPYSMCRKAGLDGLAKKFGLTPEQFGENLRDNYQRHEAEQEPTEP
IDVAEEYISNKFNTAEEVLRAAKFMVAMQLSRDPLVRKCVRETFFERAKINIKPTKKGVK
EIDENHPCYSMKYVKNKPVRDLTGDMYLKLTLAEADKMITISISEQIDGITSPSYIEEVK
QLYYRDEFSKNVQEWNSLRVESVELALTRLLLPELRKELHTHLLAEAREAVLKTCCRKLY
NWLKVAPYSVEFADEDEEEWDTGKGLRVMAVAYVPDYSQAAFACIVGPDGDCTDYLRLPC
LLKRKNSFREEEKLQKEADLLSMRNFITTKKPHVICVGGESREALMVAADLREIVGQLVE
DDQFPSISVEICDNELAKIYSNSIKGESEFRDYPHLLRQAISLARRMQDPLIEFSQLCTS
DEEILCLRYHTLQDQVPREELLEALYLEFVNRTNEVGVDINLAVLQSYTCNLVQFVCGLG
PRKGQALLKTLKQNNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVL
DGSRVHPETYEWARKMAVDALEYDDEDANPAGALEEILEAPERLKDLDLDAFAEELERQG
FGNKSITLYDIRAELNYRYKDLRSPYTSPNPEELFDMLTKENPETFFIGKMVLATVIGIT
HRKPQGDQLDQANPVRNDETGLWQCPFCLKNDFPELSEVWNHFDAGGCPGQATGVRLRLD
NGISGYIHIKNLSDKHVSNPEERVARGQTIHCRVTKIDVERFSVECTSKSSDLADKNHEW
RPPKDPFYDNEAEEKDIKTEEDAKKLKQRQTYIKRVIVHPSFHNISFKEAERLMDQMDQG
EVIVRPSSKGSDHLTVTWKVTDGVYQHIDIREEGKENAFSLGQSLWIGNEEFEDLDEIIA
RYVNPMAAHARDLLSFKYYRDTDGLKDKAEEILKEEKKKNASKIHYVLGASKSYPGKFML
SYLPRTRFRHEYISVTPEGFRFRQRVFDSVGSLFRWFKDNFREPIPGTPSTPRGAATNRT
PYHGTPNVNLAGMNPEAIQRVAQALPNHMLHSLSQVASQTPHYPHTPGGGGYGANMHTYP
NTPYTPSGQTPFMTPYHTPHATQTPRYGQQTPSHHPGHHAQGFIHPGSVTPAHRTPTHRV
VHNPHTPHSRPMHGTTVNEPMDWRRAAEAWAKLKNRESGMNTPRQDGRTTPRQHSGNSTP
RFDDLRKTTPRYDESGRGTPRSFSGLSTYGMGNRLPMSGRLPYGLSSSNKSPRSVGSGRD
SMRSTPRTNTSPHSMVESSLSGDATPLYDEN
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatggctatgaggaggaggaagaagaagaagatgaatatttggatgaagaa
ggagaagatgctgaaagaaggccacgtccaaagaaaacagctcgcaagaaagcaacaaag
aaatcaatttttgaaatatatgaaccaagtgagttgaagagaggacatttcactgatctt
gataatgagatcagaaacacagacattccagagcgaatgcagcttcgtgactttccagtt
actgcagttcctgaaggctctgatgaattggatgaagaagcagaatggatatataagcag
gcattctgtaaaccaacaatctccaaccaggatggccatggaggagctgatgcccgggat
cgagcaagaaaagggcctcaaaccattggaaagattaagaaggctctggacttcatgaga
aatcaacattttgaagtgccattcattgcattttataggaaagagtatgttcaaccagaa
ctgaacataaatgatttgtggaaagtttacaagtatgatgaaaagtggtgccagttacga
acgcggaagatgaatctggttacattgtttgaaaaaatgcgtgattatcaggctgagcag
ttaatgaaagaacctgacaaacctattcctgatggtgttcggctgctgaaggatgaggac
atagacaggctccaagcagtacagaccacagaagaactcaaagatgttcacacacatttc
ctactgtactactctcatgaagtaccagaaatgcagaaagcatggcgagccaaacaacgt
gaagcagcacgagaggcacgaaagaataagcacaaacatcgagtcaatgcagaaggagag
gaggaagaagatagagaacagccaggacaggatgaggaaattgaaccagaagatgtggaa
gatgaacctccagaaaatgaaactgtgaaacaagctgttcgaagtggcccttactcaatg
tgtaggaaagcggggttggatggtttggcaaagaaatttggattgactcctgagcagttt
ggtgagaatttgcgagacaactatcagcgccatgaggctgagcaggaacctacagaacca
atagatgtagcagaggagtatatcagcaataaatttaacacagcagaagaggttctcaga
gctgccaaatttatggttgcaatgcaactgtcacgtgatcctctggttaggaagtgcgtg
cgtgagacattctttgaacgtgctaaaattaacattaagccaactaagaagggggtaaag
gagattgatgaaaatcatccatgttacagcatgaaatatgtgaagaataaaccagtaagg
gatctgactggtgatatgtatctcaagttgaccttggctgaagcagacaaaatgataaca
atttctataagtgaacaaattgatggcatcacttccccctcctacatcgaagaagtgaag
caactgtactacagagatgagttcagtaagaatgtgcaagaatggaattccttaagggtg
gagagtgtagaattggctctcacgcggctgctgctccctgaattgagaaaggaattgcac
actcatttgttggctgaagcacgggaagcagtacttaaaacttgctgcagaaaattgtac
aattggctcaaggtggctccatattcggtagagtttgctgatgaagacgaagaagaatgg
gacacaggaaagggacttcgagtaatggctgttgcatatgttcctgactactctcaagct
gcttttgcttgcatagtagggcctgatggagactgcactgactacctaaggcttccatgt
cttctcaagaggaaaaattcatttcgagaagaggaaaaattgcaaaaggaggctgatttg
ttgtccatgagaaacttcatcacaacaaagaaacctcatgtgatttgtgtgggcggtgaa
tcacgagaagcattgatggtggctgcagatttgagggaaattgttggacagttagtagaa
gatgatcaattcccatcaatttctgtagaaatctgtgataatgagcttgccaaaatttac
tcaaattctatcaagggtgagagtgaatttcgagattatcctcatcttttacgtcaagct
atttcattagcgcgtaggatgcaagaccctctgattgaattctctcagttgtgtacatca
gatgaagaaattctttgtttgagataccatacattgcaggaccaggttccaagagaggag
cttttggaagcgctatatctggaatttgtgaatcgaactaatgaggttggagtggacatc
aacttggcagtgctgcagagttacacctgtaatttggtacagtttgtatgtggccttgga
cccaggaaagggcaagctcttcttaagactcttaagcagaacaatcagaggctagagaat
agaacacagctagttacagcctgtcacatgggaccaaaagtgttcataaactgtgcagga
ttcatcaaaatagatacaaactctctgggagatagcactgaagcatacgttgaagtgctt
gatggctcaagagtccatcctgaaacgtatgagtgggctcgtaaaatggcagtagatgct
ttggagtatgatgatgaggatgcaaatcctgctggagctttggaggaaattctagaagct
cctgaaagattgaaagatctagatctggatgcatttgctgaagaattggaacggcaaggg
tttggtaacaagagcataacattgtatgatattcgggctgaactgaactatcgatataaa
gatttacgcagtccttatacatcaccaaatcctgaagaattgtttgacatgcttacaaaa
gagaacccagagactttcttcataggcaagatggtgcttgctactgtaataggtataacg
cataggaaacctcaaggtgatcagctggaccaagctaatccagttcgtaatgatgaaact
ggactttggcagtgtccattttgtctgaaaaatgactttcctgaactttctgaggtgtgg
aatcactttgatgctggaggttgcccaggacaggcaacaggtgtaaggttacggctcgat
aatggaatatcaggttacatccacataaaaaatttgtcagacaaacatgtgagcaaccca
gaagaaagagttgctaggggacagacaattcattgtcgtgtcaccaagattgatgtggag
cgattctcagtggaatgtacatcaaaaagttcagaccttgctgacaaaaatcatgagtgg
agacctccaaaagatccattctatgataatgaggctgaagagaaagatataaaaacagaa
gaagatgcaaaaaagttgaagcaacgtcaaacctatatcaaacgtgtgattgttcatccg
tcatttcacaatatttcgttcaaggaagcagaaaggctcatggatcagatggatcaagga
gaggttatagtgagaccatccagcaagggctcagatcacctgacagtaacatggaaagtg
actgatggggtgtatcaacatattgatatacgagaagaaggtaaagagaatgcattcagt
ttgggtcagtcactttggattggcaatgaggaatttgaagatttggatgaaataatagct
cgctatgtgaatccaatggctgctcatgctagagatctgctgtcattcaaatattaccga
gatactgatggacttaaggataaagcagaagaaatactaaaggaggaaaagaagaaaaat
gcctcaaaaatacactatgtgttaggtgcttccaagagttaccctgggaagttcatgtta
tcctaccttccacgcacaaggtttcgtcatgaatatataagtgtaacaccagaaggcttc
cgtttccgacagcgggtgtttgattctgttggctcacttttccgatggttcaaagacaat
ttccgtgaaccaatcccgggcactcctagcacgccaagaggagcagcaaccaatagaacg
ccatatcatggaactcccaatgtcaatcttgctggaatgaatcctgaagcaattcagcgt
gttgcccaagctttgccaaaccacatgcttcacagtctgtcacaagtggcaagccaaaca
ccacattatccccacacacctggaggtggaggctatggagctaatatgcacacatatcca
aacactccatacactccttcaggacagacaccattcatgactccataccacaccccacat
gcaactcagactccacggtatggtcaacagacaccttctcaccatccaggtcatcatgct
caaggatttatacaccctggttctgtcacaccagcacacaggacaccaactcacagagtt
gtacataacccccacacacctcattccaggccaatgcatggaactacagtcaatgaacct
atggactggcgtagagcagctgaagcatgggctaagttgaagaacagggaatctggtatg
aatacaccacggcaagatgggagaaccactccaagacaacatagtggaaattcaacacct
cgttttgatgatctacggaagaccactccaagatatgacgagtctggtcgtggaactcct
agaagttttagtggcttgagcacatatggaatgggaaaccgtctgcctatgagtggcaga
ttaccatatggtctgtcaagcagcaacaagtcaccccgtagtgttggttctggccgagac
agtatgaggtctacaccacggaccaacacaagtccccattccatggttgaaagttcactc
agtggagatgctacacctctttatgatgagaactga
DBGET
integrated database retrieval system
