Zingiber officinale (ginger): 121967523
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Entry
121967523 CDS
T08725
Name
(RefSeq) ABC transporter F family member 4-like
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
121967523
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121967523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_29
AAA_28
AAA_23
MMR_HSR1
AAA
DUF87
AAA_22
AAA_24
Dynamin_N
ABC_tran_Xtn
AAA_16
AAA_15
MeaB
AAA_25
Motif
Other DBs
NCBI-GeneID:
121967523
NCBI-ProteinID:
XP_042373748
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All DBs
Position
3B:complement(121972622..121982736)
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AA seq
718 aa
AA seq
DB search
MVRKTAADVSSSKGGKSRESASIASAVPKKEKISVSAMLASMDKPKASSFGASKKPKPKA
KSSSYTDDIDLPPSDDEEVEVAEEETARPKARNAVTELSAATISDKELKKREKKDIFNAN
AAEQARQQALRDDHDVFTVVIGSRAAALDPDAQEGAADANVKDITIENFSVSARGKELLK
NATVKIAHGKRYGLIGPNGKGKSTLLKLLAWRKIPVPRNIDVLLVEQEVVGDARTALEAV
VSANEELVSLRKEAAALSEKPEGGDDEDDDDSGVKLAEIYERLQLLGSDAAEAQASKILA
GLGFTKEMQRRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCR
WKKTLVVVSHDRDFLNTVCNEIIHLHELKLHVYRGNFDDFESGYEQKRKETNKKFEIYEK
QMKAAKKTSNKAKQDKVDDRAKYVAAKAAKSKSKGKVEDDDVPPPEAPQRWRDYSVVFHF
PEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAG
DLVPTEGEVRRSQKLRIGRYSQHFVDLLIMEENPVQYLLRLHPDQEGFSKQEAVRAKLGK
FGLPSHNHLTPIAKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALQEF
TGGVILVSHDSRLISRVCEDEEKSEIWVVEDGTVRKFPGSFEEYKEDLLKEIKADVDE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaaaccgccgccgacgtctcctcttccaagggcggaaaatccagggaatcc
gcctccatcgcctctgctgtacccaaaaaggagaagatttccgtgtcggctatgcttgcc
tccatggacaagcccaaagcctcgtctttcggcgcctcgaaaaagcctaagcccaaagcc
aaatcctcgtcctatacggatgacatcgatctaccgccttccgacgatgaggaagtggag
gtcgcggaggaagagaccgcaagacctaaagctcgaaatgctgttactgaactgtcagcc
gccaccatctcggacaaggagctcaagaagagggagaagaaggatatcttcaatgcgaac
gctgccgagcaggcacggcagcaggccctgagggatgaccacgatgtcttcacggtggtt
attggatcccgcgcagccgcccttgatcctgacgctcaagagggcgccgccgatgctaac
gtgaaggatatcaccatcgagaatttctctgtttctgctcgggggaaggagctcctgaag
aacgccaccgtcaagatcgcccatgggaagaggtacggtcttattggtccaaacgggaag
gggaaatctactctgttaaagctccttgcttggaggaagattcccgtcccacgcaacatt
gatgtgctcctggtcgagcaggaagtagtcggggatgcaagaactgctcttgaggccgtt
gtgtcggctaacgaggagctggtgagcctccgcaaggaggctgctgctctctccgagaaa
cctgaaggaggagacgatgaagacgacgatgatagtggagtgaagcttgcagaaatatat
gaaaggttgcagcttttgggttccgatgctgcagaggcccaggcatccaagatcttagct
gggttagggttcaccaaggagatgcagcgccgtccaaccaagtcattcagcggaggatgg
aggatgaggatatccttggccagagctctctttgtgcagccaactttgttacttctggat
gagcctacaaaccatcttgatctccgagcagtattatggttagaggagtatctttgccgc
tggaagaagacgctggtggtggtgtcccatgacagagacttccttaacaccgtttgcaat
gagattatacatcttcacgagctgaaactccatgtttaccgtgggaactttgatgatttt
gaaagtggttatgagcaaaagcgaaaagaaacaaataagaagtttgaaatttatgagaag
cagatgaaagctgcaaagaagactagcaacaaggctaagcaagacaaggttgatgatcgg
gccaagtatgtcgctgccaaggcagctaagagtaagtcaaaggggaaggtggaagatgat
gatgtgccaccacctgaggcgccccaacggtggagggattatagtgttgtattccacttc
ccggagcccactgagctgacaccgccacttctgcagctcatcgaggtcagcttcagctat
ccaaacagggaggattttaggctttccaatgttgatgtgggaattgatatggggacaagg
gttgccattgtaggaccaaatggtgccggcaaatccacactgctgaatttacttgcaggg
gatttggtgcccactgaaggagaagttcgtcggagtcaaaagctgcggattgggagatat
tcccagcattttgttgatctcctgatcatggaagagaacccagttcagtaccttctccgc
cttcatccagatcaagaaggatttagcaagcaagaggctgtgcgagctaaacttgggaaa
tttggcctgcctagccacaaccaccttacacccattgccaaattatctggaggccagaag
gctcgcgttgtgtttacttctatatccatgtctaggcctcatattcttttgttggatgag
ccaacaaatcaccttgacatgcaaagtatcgatgcactggcagatgcacttcaggagttt
actggtggtgttattttggtgagtcacgactcacgtttaatatcacgagtatgtgaggat
gaagagaaaagtgagatatgggttgtggaagacggtactgttagaaaattccctggttct
tttgaagagtacaaggaagatcttctgaaagagattaaggcggatgttgatgaataa
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