Zingiber officinale (ginger): 121969328
Help
Entry
121969328 CDS
T08725
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT3-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121969328
Glycosyltransferases [BR:
zof01003
]
O-Glycan biosynthesis
O-linked Gal type
121969328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Motif
Other DBs
NCBI-GeneID:
121969328
NCBI-ProteinID:
XP_042375297
LinkDB
All DBs
Position
4A:4225149..4228693
Genome browser
AA seq
619 aa
AA seq
DB search
MRRWTGGVVILALALLLITRHALLLASTYAAAPQHLSPSLPAAPPPVLSALLHSHRIPGL
DDLFPARNFTALPPQLGTFNSSMAVWAHMRALLLRSDALPGTADGVLEASIAWKELGVSL
SERIDGKEASFVLPDAAQLEKRSCPFSISGSGSSVTIPCGFVEDSAVTLVGSPVGVNGSG
RFWIQLAGSGLPDALPFVLHYNVSFGEDGPALAQNSRTPDKGWGVWEFCPSYGFGSIESN
PKVDGLVRCNEQLAESMISKTSNGSLSNNSKPHEPSKRSSQLSSGFPFIEGLPFTATLWA
GMEGLHMTVNGRHETSFAYRESLEPWLISEVTVGGDLNLHSLLMNGLPISEDPDLVDMEF
LRAPPLPKKRLLMLVGVFSTANNFKRRMALRRSWMQYEAVRSGSVAVRFLIGFHKNKQVN
LELWREAQTYNDIQMMPFVDYYSLITLKTVATCILGAKILPAKYIMKTDDDAFVRIDEIL
SNLKRTASKALLYGQISFESSPHRDEDSKWFISPEEWPDEFYPPWAHGPGYIISRDIAKF
IVQGHQERYLRLFKLEDVAMGIWIQEYNRSAHEVNYVNDDRFHNDGCEPNYILAHYQMPR
LLLCLWEKLQKEQEAICCE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatggaccggcggcgtcgtcatccttgccctcgccctacttctcataacccgc
cacgcccttctcctcgcctccacctacgccgctgcccctcagcatctgtccccctccctc
cccgctgctcctccgcctgtgctttctgctctcctccactctcaccggatccctggcctc
gacgatctcttccctgcccgcaatttcaccgccttgccgcctcagctcggcacttttaac
tcgagtatggccgtgtgggctcatatgcgcgctctcctcctcagatccgacgcgctccct
ggtactgcagacggtgtgttggaggcatctattgcgtggaaggagctgggtgtctctctg
agcgagaggatcgatggcaaagaggcctcttttgtgctccctgatgctgcccagctcgag
aagaggagctgtcctttttccatcagcggaagcgggagctccgtcacgatcccgtgtggg
tttgtggaggactctgcggtgacactggttggatctcccgttggggtcaatggcagtggc
cgattttggattcagctcgctggatctggtctccccgatgctctaccttttgtgctgcat
tacaatgttagcttcggcgaagacgggcctgctcttgcgcagaactcgaggacgccggat
aaaggctggggcgtgtgggagttctgcccatcttacggattcggctccatcgaaagcaac
cctaaagtcgatgggctcgttcggtgcaatgagcagttagccgaaagcatgatatccaag
acttcaaatgggagtttgtcaaacaatagcaagcctcatgagccatcaaaaaggagctca
cagttaagctctggttttccatttattgagggacttccatttactgccacattatgggct
gggatggaaggactccatatgaccgtcaatgggagacatgaaacttcatttgcttacagg
gagagtcttgagccgtggttgatcagtgaagtcacggtgggtggtgatttgaatcttcac
tcattgctgatgaacggtttgcctatctccgaggatcctgatttagtcgatatggaattc
ctcagagctccaccactgcccaagaaaaggcttttgatgttggttggggttttctccact
gcaaacaacttcaagcggagaatggctttgagaaggtcttggatgcaatatgaagctgtt
cgatcgggttctgttgctgtgagatttttaattggttttcacaagaacaagcaagtcaac
ttggaactatggagagaagctcaaacttacaatgacatccagatgatgccttttgtggac
tattacagtctaatcacattgaaaacagttgccacttgcatccttggggccaaaattctg
cctgctaagtatatcatgaaaacagatgatgatgcctttgtaagaattgatgaaatcctc
tctaatcttaagagaactgcttccaaggcactcttgtacggtcagatatcctttgaatca
tcacctcacagagatgaggatagtaaatggtttataagtcctgaggaatggcctgatgag
ttttacccaccatgggctcatggtcctggatacatcatatccagggacattgccaagttc
attgttcagggtcaccaagagagatatctccgactgttcaagctggaagatgtggcaatg
ggaatctggattcaagaatacaacaggagtgcgcatgaggtaaactatgtgaacgacgat
cgatttcacaacgatggctgtgaacccaactatattcttgctcactatcaaatgccaaga
ttgctactgtgcctatgggagaagctacagaaagaacaagaggccatatgttgtgaatag
DBGET
integrated database retrieval system
