KEGG   Zingiber officinale (ginger): 121971327
Entry
121971327         CDS       T08725                                 
Name
(RefSeq) DNA repair protein REV1-like isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    121971327
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    121971327
SSDB
Motif
Pfam: IMS IMS_C BRCT BRCT_2 POLH-Rev1_HhH PTCB-BRCT IMS_HHH LIG3_BRCT
Other DBs
NCBI-GeneID: 121971327
NCBI-ProteinID: XP_042378457
LinkDB
Position
4A:complement(133902161..133925324)
AA seq 1070 aa
MGSNSSDRPSSSVSSFASAAASGGSLKRSRNRTPQNPLRSTTKRKSPFADFGSYMAEKNR
KLGAQFRADAASVSSLGSDGAPVDSEEDKGVFRGVSIFVDGFTIPSSQELRGYMLRHGGR
FENYFSRDTVTHIICSNLPNSKMRNLRAFSHGLPVVRPEWVLHSLAANRLLSWAPYQLVH
GACKQQKLSTYFRHQSISTSSDAKGSINHDEEIKVGQNHSVVPTDGQTSECGGISIQVGD
VACLKSEEFSQARDANQEPSASDMVHSTLTDPNFVENYFKNSRLHFIGTWRNRYRQRFSK
LLTGVKSSNENLKCHSTKQKTAIIHIDMDCFFVSVIIRNFPDLVHKPVAVCHSDNPRGTA
EISSANYVARNFGVKAGIFVRDAKVCCPNLVILPYDFEAYQEVAEQFYNILHKHCSKVQA
LSCDEAFLDVTECDVDPEDIALAIRKEIAETTRCTASAGIAENLLLARLATRSAKPNGQR
FLPSEKVEDYLNDLPVMELPGIGYATHEKLKKRQIQTCGQMRMTQKEGLQKDFGEKIGDM
LWNYCRGIDNRNVGEVQEAKSIGAEVNWGIRFNDMTDCNHFLINLCKEVSLRLQGCGVQG
RTVTLKVKKRKQGAAEPLKFMGCGDCQNMSRSITVPIAIDNEAALLRIAKKFLSSFHIDV
KEVRGIGLHLTKLESAKITRKGRENIAVWLSSPMHATRSKCKQISQSDKQCDNGDFLFSS
GPPESGDLDSSHKLDQDKPTLLFQDAGSNCSSIKGADCVRPIRSSVLPPLQDLDIDVVRN
LPTEIILEMDVLYKGELSDLISKSKGNNCLTHVCSSTVSLIDASTNSADAGISDAHIDSV
KLGLDSKDKGKMPICENVESISYVDQVTMEPKLFDLMPASLSQADASVFEQMPEDVKADV
HGLLPLHRELKVSKDFYTCFDFPSCVQFPDPHLKTHLWSGDPPWWVEKFNTSKNILLNVI
SRHAKSSKDIRLSSILQSVAPFLLPVCELSNEVYAEAICWLHELLAQYIVLKIGSDIEEI
YNCFCFLKRISPSSKILLLVYNSALPLFQALVNENYGGKLRLSVIQTTDE
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgggctctaattcctcagatcggccctcctcctcggtctcctctttcgcctctgcagct
gcatctggtggctccctgaagaggagcagaaaccgaaccccacaaaatcccctccgctcg
acgaccaagagaaaatcccctttcgccgacttcggaagttacatggcggaaaagaaccgg
aagctgggagctcaatttcgagcggatgccgcctccgtttcgtcactcggctccgatggc
gctcccgtcgattccgaagaagacaagggcgtctttcgtggggtctccattttcgtcgat
ggctttaccatcccatccagtcaggaactgagggggtacatgctgaggcatggtgggcga
tttgaaaattacttctcgagagatacagtgactcatatcatatgcagcaatttacccaat
agtaaaatgagaaaccttcgtgcgttcagccatgggttacctgtcgttagacctgagtgg
gtgctgcacagcctggcggccaatagactcttgagttgggctccgtatcagcttgtacat
ggtgcatgcaaacaacagaaactctcaacttactttcgtcaccagagcatttcaaccagc
agcgatgctaaaggttctataaatcatgatgaggaaattaaggttggtcaaaatcactcg
gtggtaccaaccgatggccaaacatctgaatgtggagggataagcattcaagttggtgat
gtggcatgcttgaaaagtgaagaattttctcaagcaagagatgcaaatcaagaaccctct
gcttccgatatggtacattcaactcttacagatcccaattttgtggagaactacttcaag
aattccaggctgcattttattgggacatggagaaacaggtaccgacagcgattttcaaaa
ttgcttactggagttaaaagcagcaatgaaaatttgaagtgtcattcaaccaaacagaaa
actgcaatcatacacatcgatatggactgctttttcgtttcggtgattataagaaacttc
ccagatttggttcataagcctgtagcagtgtgtcactctgacaaccccagaggaactgct
gaaatatcatctgccaattatgtggcaagaaattttggtgttaaggctgggatttttgtc
agagatgccaaagtttgctgccctaatcttgttatattgccttatgactttgaggcttat
caagaggtggctgagcaattctacaacatactacataaacattgcagcaaagttcaggca
ttaagctgtgatgaagcatttttagatgtgacagaatgtgatgttgatcctgaagacata
gcattggccattaggaaggaaattgctgagactacacgttgtacagccagtgcaggaatt
gctgagaatttgcttcttgctcgtttggctactaggtctgcaaaacctaatggtcagcga
ttccttccatctgaaaaggtagaagactacttaaatgatcttcctgtcatggaacttcct
ggcattgggtatgctacacatgagaagcttaagaagaggcaaattcaaacctgtggtcaa
atgcgcatgactcaaaaggaaggtctgcagaaggactttggtgaaaaaattggtgacatg
ctgtggaattattgtcgcggaattgataatcgaaatgttggagaagttcaggaagcaaaa
tctattggtgctgaagttaattggggaattaggttcaatgatatgacagattgtaatcat
ttcctcatcaatctctgcaaggaggtctcattacggcttcagggatgtggagtacaaggt
cgtactgttacattgaaggtgaaaaaaagaaagcaaggagcagctgagccgttaaagttc
atgggctgtggggactgccaaaatatgagccggtccattacggtacctattgccatagat
aatgaagctgcccttctgagaatagcgaagaaatttttgtcttcttttcacattgatgtc
aaggaagtccgaggcattggtttgcatttaacaaagcttgagagtgcaaaaattactagg
aaaggtcgtgagaatatagcagtatggctcagttctcctatgcatgcaacgagaagcaaa
tgcaaacaaattagtcagtctgacaaacaatgtgataatggagattttttattttctagt
gggccaccagaatcaggagatttagacagttcacataagctagatcaggacaagcctact
ctgctctttcaagatgcaggatctaattgctcttcgattaagggtgctgattgtgtcaga
ccaattagatcatcagtattgcctcctttacaagatcttgatatagatgtggttaggaat
cttcctactgaaattatattagaaatggatgttctttacaagggggaattatctgatctt
atcagcaagagcaaagggaacaattgcttgacccatgtatgctcctctactgtatccttg
atagatgcaagcactaacagtgctgacgcaggcatatctgatgcacatattgattctgtg
aaactgggtctagattcaaaagacaaggggaaaatgcctatctgtgagaatgtggagagt
atcagctatgtagatcaagtaacgatggagcctaaactgtttgatttaatgcctgcatct
ctaagccaggcagatgcttcagtttttgaacagatgcctgaagatgtgaaagctgatgta
catggcctacttccacttcacagagaattaaaggtctctaaagatttttatacttgcttc
gactttccaagctgtgtacaatttccagatcctcacttgaaaacccatctttggtcgggt
gatccaccatggtgggtggagaaatttaatacaagcaagaacattcttctgaacgttatt
tctaggcatgccaaatccagcaaagatattcgtctttcatctattttgcagtctgtagct
ccattcctgttgccagtttgtgaattaagcaatgaagtatatgctgaagcaatctgttgg
ttacatgagcttcttgcacagtatattgttctaaaaattgggtctgatattgaggagatt
tataattgcttttgttttctaaaacggatctcaccatcatcaaaaattttattgctagta
tacaatagtgcacttcctcttttccaggctttggtgaacgagaattacggagggaaattg
cgtctgtcggttatacaaaccactgatgaatga

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