Zingiber officinale (ginger): 121972022
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Entry
121972022 CDS
T08725
Name
(RefSeq) ent-copalyl diphosphate synthase 1-like
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00904
Diterpenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
121972022
Enzymes [BR:
zof01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
121972022
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GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
HGWP
Motif
Other DBs
NCBI-GeneID:
121972022
NCBI-ProteinID:
XP_042379535
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Position
4A:complement(160912278..160920548)
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AA seq
805 aa
AA seq
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MTWTAATTAAASAAPSSLLPPRLRLLLLPAAGACKLRWIAAAPKAQKRGRSHALSRHSTA
APADYGSGLIRNALPLLQLPEQEDEFLEEEEGTIWGMVQEVKAMLRSMGDGEISISAYDT
AWVALVRDPEGEGRRSLFPASLRWIADNQLGDGSWGNAAVFSAHDRLISTLACAVALASW
NLHPDKCRRGVEYVRENMWRLGEEAAEHMPIGFEVAFPSLLDLAKELGLEIPYSHPCLQG
ITAMRDLKMERIPKQVLHEVPTTLLHSLEGMVGLDWEKLLRLQCQDGSFLFSPSSTAYAL
MQTGDGNCLKYLHRLVRRFGGGVPNVYPVDLFERLWAVDRLQRLGIAGYFSPEIKDCLDY
VHRYWTEDGICWAKESRVFDIDDTSMGFRLLRLHGYPVSPGVLRQFEKDGEFVCFAGQSN
QAVTGMFNLNRAAQVAFPGEEILERAKSFSYAFLREKQAAHQLLDKWIITKDLPGEVEYA
LDFPWYASLPRVEARFYLEQYGGGSDIWIGKTLYKMPLVNNDVYLELAKLDFNHCQALHQ
LEWLHLQKWYEEAGLQWHGVSRRALLEDYFLAAACIFEPERATERLGWVRTMVLSKAVSS
YLSDNSCTETSRQALILNFLDDENYCSNGHGISRAKVRRKGEHLAELLHQLVDGLVALAA
NSHQQRMRHYLHEAWKVWFSIWKCEEENIGLLLVTTIEACGGRFNLTSAQPQYDELAHLL
SSICALLLPRKLIKEDMNKETIDEKMQELAQCVLRSATPDDQGLDFHQTKQTFLLVAKGF
YYTAHCPEDVLNSHITKVLFQPVDK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacttggacggcggccaccaccgctgctgcctcggcagcaccctcctcgctgctcccg
ccgcggctccgcctcctcctcctccccgccgcaggtgcgtgcaaactgcgatggatcgcc
gcggcgccgaaggcccagaagagggggagaagccacgcattgtcccgccacagcaccgcc
gctcctgcagattacggcagcgggttgatacggaacgcattgccgcttcttcaattgccg
gagcaagaagatgaattcttggaggaggaggaggggacgatatgggggatggtgcaagag
gtgaaggcgatgctgcggtcgatgggcgacggcgagatcagcatctctgcttacgacacg
gcgtgggtggcgctggtgcgggacccggagggagaaggccggcggtcattgttcccggcg
agcctccggtggatcgcggacaaccagctcggcgacggctcgtggggcaacgccgccgtc
ttctctgcccacgaccggctgatcagcacgctggcctgcgccgtcgcgctcgcctcctgg
aatctccaccccgacaagtgccgcagaggggtggagtacgtgcgggagaacatgtggagg
ctgggagaggaggcggcggagcacatgccgattggattcgaggtggctttcccttcactg
ctggacctggccaaggagctgggactggagattccctactcgcatccttgtttgcagggc
ataaccgccatgagagaccttaaaatggagaggattccgaaacaagtgctacacgaggtg
ccaaccacgctgctacatagcctggaaggaatggttggcctggactgggagaagcttctc
cgtctacagtgtcaagatggctccttcctcttctcgccgtcctccactgcgtacgcgctg
atgcagacgggcgacggcaattgcctcaaatatctccatcgactcgtccgtagattcggg
ggaggagtgccgaacgtctaccctgtggatctcttcgagcgcctgtgggcggtggatcgc
ctgcagcgcctgggaatcgccggctacttctcgccggagatcaaagactgcctcgattac
gtgcataggtactggacggaggatggcatttgttgggccaaggaatcgagggtcttcgac
atcgacgacacgtcgatggggttccggctgctgcggctgcacggttatccggtctccccc
ggcgtgctgcggcaattcgagaaggatggcgagttcgtgtgcttcgcagggcagtcgaac
caggcggtgacggggatgtttaacctgaaccgggccgcgcaggtggccttccccggggaa
gagatactggagcgagccaagagcttctcttatgcctttctgcgagagaaacaagctgcg
caccaactgctcgacaaatggatcatcaccaaggatttgcctggggaggtagagtatgct
ctggatttcccctggtatgccagcctgccgcgcgtcgaggcaaggttctacttggagcag
tatggaggaggaagtgatatttggattggcaagactctgtacaagatgcctctggtaaac
aatgatgtgtatttggagttggctaagttggacttcaaccattgccaagctctccatcag
ttggagtggctccatctccaaaagtggtacgaggaggcgggccttcagtggcacggtgtg
agcagaagagccctgttggaggactacttcttggcagctgcttgcatatttgaacctgaa
cgggcgaccgagaggttgggttgggttcggactatggttctctcgaaggctgtctcatcc
tacttgagtgataactcatgcactgaaacaagtaggcaagcattgatactgaatttcctt
gatgacgaaaactactgcagcaatgggcatggcattagcagggcgaaagtgaggagaaag
ggggagcatttggcagagttgcttcaccagctagttgatggacttgtggcattggctgca
aactcccatcaacagcgaatgcgccactacttacatgaagcttggaaagtgtggttctcg
atctggaagtgtgaggaggaaaacatcgggttgcttctagtgacaaccatcgaagcttgt
ggagggagattcaatttgacttcagctcaaccacaatacgacgagcttgctcacctccta
tcatccatttgtgctctacttttgccaagaaagctcatcaaagaggacatgaacaaggaa
acaatagacgagaagatgcaggagctagctcagtgtgtgctccggagcgctactccggac
gatcaaggcctcgacttccaccaaaccaagcaaacatttcttctcgtggcgaagggcttt
tactacactgctcattgcccggaggatgtcctcaacagccacatcaccaaggtcctcttc
caacctgtggataaatag
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