Zingiber officinale (ginger): 121974519
Help
Entry
121974519 CDS
T08725
Name
(RefSeq) ABC transporter B family member 1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121974519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121974519
04147 Exosome [BR:
zof04147
]
121974519
04090 CD molecules [BR:
zof04090
]
121974519
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121974519
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121974519
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121974519
CD molecules [BR:
zof04090
]
Proteins
121974519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
RsgA_GTPase
nSTAND1
AAA_21
AAA_30
SbcC_Walker_B
DUF815
AAA_15
Mg_chelatase
APS_kinase
Rad17
DUF87
Motif
Other DBs
NCBI-GeneID:
121974519
NCBI-ProteinID:
XP_042381562
LinkDB
All DBs
Position
4B:complement(4886573..4892507)
Genome browser
AA seq
1369 aa
AA seq
DB search
MSGQQQLQQAFEQEEVMKRVALVEKWSQPELQAFHLPSPPRPPSHPKGGDLLVAEVVERV
GGGDSLASVYEMGVANAKTEEQPPPQLTAASPSAGNDGQEDKKPESPAQTVGFVELFRFA
DGLDCALMAVGTVGAIVHGCSLPIFLRFFADLVNSFGSNTGDPSTMANEVAKYAFYFLVV
GAAIWVSSWAEISCWMWTGERQSTKMRIVYLEAALNQDVRYFDTGVRTSDVVFAINAEAV
MVQDAISEKLGNFIHYMATFVSGFVIGFTAAWQLALVTLAVVPLIAVIGGMHTSALAKLS
SKSQDALSQANNIAEQALAQVRTVQSFVGESRVLQAYSAALGVAQKIGYRSGFSKGLGLG
ATYFTVFCCYALLLWYGGFLVRHHHTNGGLAISTMFAVMIGGIALGQSAPSVVAFAKARV
AAAKIYQTIERRPSIDRKNDSGIELGAITGLVELKNVDFAYPSRSDVPVLRDFSLTVAAG
KCIALVGSSGSGKSTVVSLIERFYDPTSGQILLDGQDIKSLKLKWLRQQIGLVSQEPALF
ATTIKENLLLGREGATQVEVEEAARVANAHSFIVKLPDGYDSHVGERGMQLSGGQKQRVA
IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKVDVVAV
LHQGTVAEIGTHDELMTKGQSGLYAKLIRMQEQAHEAALINARKSSARLSSARNSVSSPI
ITRNSSYGRSPFSRRFSDFNVSEFGISVDTNHPMEHLAFRDQASSFLRLAKMNSPEWSYA
LIASVGSVVCGSMSAFFAYVLSTVLSAYYAQDYKYMRQEIRKYCYLMVGVSSAALLFNTV
QHLFWDVVGENLTKRVREKILASVLRNEIAWFDREENASARIARRLTSDAHNVRSAIGDR
ISVIVQNVSLLLVAFTAGFILEWRLAMVLVSVFPIVVVATVLQKMFITGFSGDLEGAHTK
ATQIAGEAVANIRTVAAFNSEAKITQLFATNLQAPLVRCFWKGQVAGSGFGVAQLFLYAS
YALGLWYASWLVKHGISDFSKTIRVFMILMVSANGVAEALSLAPDFIKGSCALRSVFELI
DRQTEIEPDDPDATPLPGCIRGEVELKHVDFAYPSCPNLPVLCDLTLRAPAGKMLALVGP
SGCGKSSVISLVQRFYEPTSGRVLIDGKDIKKYNLKALRQAIAVVPQEPCLFASTIFENI
AYGREAATEAEVVEAATLANAHKFISALPDGYRTWLGERGVQLSGGQRQRVAVARALVKK
APILLLDEATSALDAESERSVQDALERSGTERTTIAVAHRLASVRNAHVIAVIDDGKVVE
QGTHWHLLKHHPDGSYARMLQLQRFANGAATANGTSSLGPSTSAREATR
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagcaacagctgcagcaggcttttgagcaggaggaggtgatgaagcgggtg
gcgttggtggagaaatggagccaacctgagctccaggccttccacctcccgtcccctccc
cgtcctccttcccacccaaaaggcggcgacttgctggtcgccgaagtggtagaaagagtc
ggtggcggtgactcccttgcctctgtctatgagatgggggtcgccaatgccaagacggag
gaacaacctccgccgcaattgactgcggcatctccatcggccgggaatgatggccaggaa
gacaagaagcctgagtcgccggcgcagacggtgggattcgttgagctgttccggttcgca
gatgggctcgactgcgcgctgatggccgtcggcaccgtcggagccatcgtccatgggtgc
tcccttcccatattcctccgcttcttcgccgatctggtcaattcgttcggatccaacact
ggcgatcccagcaccatggccaacgaggtcgccaagtatgcattctacttcctcgttgtc
ggcgcggcgatttgggtgtcttcctgggccgagatatcgtgttggatgtggacgggggaa
cggcaatccaccaagatgaggatcgtgtacctggaagcagcgctgaatcaggacgtccgc
tacttcgacaccggggtgcgcacctccgacgtcgtcttcgccatcaacgccgaggcggtc
atggtgcaggacgccatcagcgagaagcttgggaacttcatccactacatggcgaccttc
gtgtccggctttgtgatagggttcacagcggcgtggcagctcgcgctcgtcacgcttgcc
gtcgttccgctcatcgccgtcatcggcggcatgcacacttccgcactagccaagctgtcg
tccaagagccaggacgccctctcccaggccaacaacatcgcggagcaggcgcttgcccag
gtaaggaccgtgcaatccttcgtcggcgagtcgagagtcctccaagcctactctgccgcg
ctcggagtagctcagaagattggctaccggagcggattctccaaaggccttggcttgggc
gcgacctacttcacagtcttctgctgctacgccttgcttctatggtacggagggtttctc
gtgcgccaccaccacaccaatggcggactagccatctccaccatgttcgccgtcatgatc
ggaggaatagctcttgggcaatcagctccgagcgtagtagcatttgcgaaagcaagggtg
gcagcagcaaagatttaccaaacgattgagcgaaggccaagcatcgaccggaagaacgac
tctgggatcgagttgggtgccattacagggctggtggagttgaagaacgtggactttgct
tacccatcaaggtccgatgtccctgtactccgggatttttcgctcactgttgctgcaggg
aagtgcatcgcattagttggaagcagcggctctgggaagagcaccgtggtttcgctcatc
gaaagattctacgatcccacttcaggacaaattctacttgatggacaagacatcaaatct
ctgaagctaaagtggctcaggcaacaaattgggcttgtgagccaagagcctgctctcttt
gcaaccaccatcaaggagaatcttctccttggcagggaaggtgccacacaagtagaggtc
gaagaagctgccagagttgcaaatgcccactctttcattgtgaagctaccagatggctat
gattcccatgttggagagagagggatgcagctctctggtggccaaaagcaacgtgttgct
atcgccagagcaatgctaaagaatcctgcaattcttctactagatgaggcaactagtgcc
cttgattctgagtctgagaaactcgtgcaagaagctcttgaccgattcatgatcggtcgc
accacgcttgtaattgcccaccgtctgtcaaccatccgcaaggtcgatgttgttgcagtt
cttcatcaagggaccgtcgcagagattggcacacatgatgaactcatgacgaaaggtcag
agtggactctacgcaaagctaattcgcatgcaggagcaggcacatgaggcagctctcatc
aatgccaggaagagcagtgcaaggctttcaagtgctagaaattcagtgagctccccaatt
attaccaggaactcatcgtatggccgatccccattttcccgtcgtttctccgacttcaat
gtatctgaattcggcatctcagtcgatacaaaccacccaatggagcatcttgcatttcga
gaccaggctagctcattcttgcgtcttgcgaagatgaactcaccggaatggtcgtacgcc
ctaatagcttcagtcggttccgtggtgtgcggttctatgagtgctttctttgcatatgtc
cttagcacggttctcagtgcttactatgctcaggattacaagtacatgcgtcaggagatt
aggaaatattgctacctcatggtcggcgtttcatctgcagctttgctcttcaacactgtg
cagcatctcttctgggatgtggtaggggaaaatttaaccaaacgtgtccgggagaagatt
cttgcatctgttctccgaaacgagatcgcatggttcgacagagaggagaacgccagtgct
aggattgcacgtaggctgacatcggatgctcacaacgtgcgatctgcaatcggagatcgt
atatcagtcatcgtgcagaatgtttcactgttgcttgtggccttcactgctggattcatc
cttgaatggcggctagccatggttcttgtctctgtttttccgatcgtggtcgttgcgaca
gttcttcagaaaatgttcataacgggcttttcaggggaccttgaaggagctcacaccaag
gccacacagatcgccggcgaggccgtggccaacatccggacagttgcagctttcaattca
gaagcaaagatcacccaactattcgcaaccaacttgcaggctccgctcgttcgctgcttt
tggaagggtcaagtagcagggagtggattcggtgtcgctcagttgttcttgtatgcttcg
tatgccctcggtttatggtacgcttcatggctcgtgaagcatgggatatcagatttctcc
aagacgattcgcgtgttcatgatcctcatggtctcagctaacggtgtcgccgaggccctc
tccctcgcacctgacttcatcaagggcagctgcgccctgcgatccgtgttcgagctgatc
gaccgccaaaccgaaattgagcctgatgatcccgacgccactcctctacctggctgcatc
cgtggcgaggtcgagctcaagcacgtagactttgcttatccatcctgcccgaacttgcct
gtgctctgcgatctcacactgcgtgcccccgcaggaaagatgctcgctcttgtcggcccg
agcggctgcgggaagagctccgtcatttcgttggtccaaaggttctacgagccgacatcg
ggccgcgtgctcatcgacgggaaggacataaaaaagtacaacttgaaggcgctgcgtcag
gcgatcgcggtggtgcctcaggagccatgcttgtttgcttcaaccatctttgagaacatc
gcgtacgggcgggaggcagcgacggaggcagaagtggtggaggccgcgacgctggccaac
gcgcacaagttcatatcggcattgcccgacgggtacaggacatggctaggggagcgaggg
gtgcagctatcgggcggacagaggcagagagtagccgtggcacgggcactagtgaagaag
gcgccgatactgctgctggacgaggcaacgagcgcactggacgcagagtccgagaggagc
gtgcaggatgcactcgagcggtcggggacggaacgaaccaccatcgcggtggcgcaccgc
cttgcgtcggtaaggaacgctcacgtgatcgcagtgatcgacgatgggaaggtggtggag
caaggaacgcactggcacctgctcaaacaccatcccgacgggagctacgcgcgaatgctg
cagctgcagcgcttcgccaatggagctgcgactgcaaatgggacgtcgtcgctgggaccg
tcgacgagtgccagagaagctacaagatag
DBGET
integrated database retrieval system
