Zingiber officinale (ginger): 121974747
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Entry
121974747 CDS
T08725
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121974747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121974747
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
121974747
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121974747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
121974747
NCBI-ProteinID:
XP_042381888
LinkDB
All DBs
Position
4B:12902839..12906280
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AA seq
381 aa
AA seq
DB search
MSGAPKLLSSDAADSEARPVLMPGGNQAKSPAAAAQKPVSKPLNKTECLEVAGSEKKKKK
AASSAADLPLIRSSLIALSAFRRHDLLSQPNLPMSASCSSDASTDSFCSQSSIGRIGRTS
LTRQSSQKTIKIVAKAEKDVPPAELFQGKRKCAWVTPSTESCYATFHDEEWGVPIHDDKK
LFELLVLSGALAELTWPVILNKRHMFRDVFSKFDPVAVSKLNEKKIVASGSIGSSLLSEP
KLRAIVENARKMLKIIDEFGSFDRYCWSFVNYKPIVCEFRYPRQVPVRTAKADVMSKDLV
RRGFRSVGPTVIYSFMQAAGLTNDHLISCFRFKECVAAASLSAGGSLEVKVTNNLKANEN
LIMQEGVELELSRGAEKVSLS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagctccgaagttactatcctccgatgcagctgattctgaggcgagacctgtc
ctaatgcctggcgggaaccaggccaagtctccggccgccgctgcccagaagccagtttcg
aagcctttgaataaaacagaatgcttagaggttgcaggtagtgagaagaagaagaagaag
gctgcaagttctgccgctgatctccctctcattcgatctagtttaatcgctctctctgcg
tttaggaggcatgatttgttgtcgcaaccaaatctgccgatgagtgcttcttgctcctct
gatgcttccacagattcgttttgtagccaatcctccataggaaggattggcagaacaagc
ttgacaagacagagtagtcaaaaaacaattaagattgtggctaaggcggagaaggatgtt
cctccagcagaattatttcaaggaaagaggaagtgtgcttgggtgacgcccagtacagaa
tcgtgttacgccactttccatgatgaagaatggggagttcctattcatgacgataagaaa
ttatttgaacttcttgtactatcaggtgcactagctgagcttacatggccagttatcctt
aacaaaaggcacatgtttagggatgttttctccaaattcgatccggttgcagtttccaaa
ttgaacgagaagaaaattgttgcatctggaagcatcggtagctcccttttgtcggagcca
aagttgcgagctatagttgagaatgcacgaaagatgctcaagataatagatgagtttgga
tcattcgatagatactgctggagctttgtgaactacaagcctatcgtctgtgaattccga
tatccacgtcaggtgcctgttaggactgcaaaagccgatgtgatgagcaaagacttggtt
cgacgaggctttcgcagtgtgggtccgacggtaatctactccttcatgcaggctgctgga
ttgacaaatgaccacctcatcagttgctttcgtttcaaggagtgcgtagcggctgcatcc
cttagtgcagggggctcactagaagttaaggtaacaaacaacctgaaagccaatgagaac
cttataatgcaggaaggggttgaattggaactgtcaaggggggcagagaaggtaagcctt
tcctag
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