Zingiber officinale (ginger): 121975778
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Entry
121975778 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC121975778
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121975778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121975778
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
121975778
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121975778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Plant_NMP1
Glyco_transf_15
Motif
Other DBs
NCBI-GeneID:
121975778
NCBI-ProteinID:
XP_042383561
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All DBs
Position
1B:complement(120177622..120180089)
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AA seq
396 aa
AA seq
DB search
MCNSKVKSGHTMEVADIGGRPVLQPASNRIGPLEAARPLKKTLQKSLSLPSSFAKNAARA
DADHNAPVTPTKLSPPVSPKPKQAKAAPQRGIESNGLSTSSDKLAVPKPTPTKLPRPVMK
RSMSSVGAGQLAVSSESMSLLGFDRAPGSIAAAQREHAVLAQAKRKMRIAHYGRTPAKLD
GNVVPVDSSTIDDVNSQDEKRCSFITSNSDSVYVAYHDEEWGVPVHDDKMLFELLVLAGV
QVGLDWTTILKKREEFKAAFAEFDAELVAMFTERQMASVCAACVLDIGKVRGVIDNAKRI
LEVRREFASFANYLWGFINHKPLSPNYRSCRKIPVKTSKSESISKDMVRRGFRFVGPTVI
HSFMQAAGLTNDHLVSCPRHLHCSMTTITNANDYPA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaattccaaggtaaagtccggccatacaatggaggtggcggatatcggcggccgt
ccggtcctgcagcctgcctccaaccgcatcggcccgctggaggctgctcggccgctgaag
aagaccttgcagaagtccctctctttgccctcctcgttcgccaaaaatgctgctcgagcg
gatgcggatcacaatgctcctgtgactcctactaagctctcgccccctgtctcgcccaag
ccgaagcaggctaaggctgctcctcagcgaggcattgagtcgaacgggttgagtacgagc
agtgataagcttgcggtgccgaagccgactcccactaagttaccgcgtccagtgatgaag
aggtcaatgagctccgtaggagccggccaactggctgtgtcgtcggaatcgatgtctttg
cttggttttgacagggctcccggcagcatcgccgcggcgcagagggagcacgccgtgctc
gctcaagcgaagcgcaagatgcgtattgcgcactacggccgcacgccggcgaaacttgac
ggaaacgtagttcctgttgactcatcaacgatcgatgatgtgaatagtcaagatgagaag
agatgcagtttcatcacatcaaattctgattctgtgtatgttgcataccatgatgaggag
tggggagtgcccgtccatgatgacaagatgctatttgaattactcgtattggcaggagtt
caagttggtttggattggactaccatattgaagaaaagggaggaattcaaggctgctttt
gctgagttcgacgcagagttggtggccatgttcactgagaggcaaatggcatcagtttgt
gcagcttgtgtgttggacataggaaaggttaggggagtaatcgacaatgcgaagagaatc
cttgaggtcagaagagagtttgcatcatttgccaattacttgtgggggttcatcaaccac
aagcccctctctcccaactacaggtcctgcaggaaaatcccggttaagacatccaaatca
gagtccatcagcaaagacatggtgcgccgtgggttccggttcgttggcccgaccgtgatc
cattccttcatgcaggctgctgggctgacaaatgaccacctcgtctcatgcccccgccac
cttcattgctccatgacaacaatcaccaatgccaatgactaccctgcttga
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