Zingiber officinale (ginger): 121976728
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Entry
121976728 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC121976728 isoform X1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121976728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
121976728
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
121976728
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121976728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
121976728
NCBI-ProteinID:
XP_042384963
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All DBs
Position
4B:complement(130038544..130043002)
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AA seq
396 aa
AA seq
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MPPGAPKVRSINVADSEARPVLVPGGNQARSVAAAQKPASKPLNKTENPEAAATAAENKK
KKKDTSPTANLPPVRSSLSAPSALRRHDWLLQSSLSMNASCSSDASTDSFCSRASTGRIG
RTNLMSKRRQSIPTVSKIVAKAEKNVPDDAVMSIPELVHGKRKCAWVTTNTESCYAQFHD
EEWGIPVHDDKKLFELLVLSGALAEFTWPAILTKRQIFRDVFLEFDPVAVSKLNEKKIVA
PGSSGSSLLSEPKLRAIIENARQILKIIDEFGSFDKYCWSFVNYKPIISRFRYPRQVPAK
TPKADVISKDMVRRGLRSVGPTVVYSFMQAAGLTNDHLIRCFRFEECITAASPSPNEVHE
ATVPVNLKAKENLLDQGLMEQIDSELSRAVEEMNIS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctggagctccaaaggtccgttccatcaatgtggctgattctgaggcgagacct
gtcctagtgcctggcggaaaccaggcaaggtctgtggcagctgctcaaaagccagcttcg
aagcctttgaataaaactgagaacccagaggctgctgctactgctgctgagaataagaag
aagaagaaggatacaagtccaactgctaatctgccacctgttcgttctagtctaagcgct
ccctcagctcttaggaggcacgattggcttttacaatcaagtttatcgatgaatgcttct
tgctcctcagatgcgtcgacagattcattctgcagccgagcctccaccggaaggattggt
aggacaaacttgatgagcaagcggagacagagcattcctactgtaagtaagattgtggct
aaggccgagaagaatgttccagatgatgcagtcatgtctataccggaacttgtgcatgga
aagagaaagtgtgcttgggtgacaaccaatacagaatcatgttatgctcaattccatgat
gaagaatggggaattcctgttcatgatgacaagaaattatttgagcttcttgtactctct
ggtgctctagctgagtttacatggccggctatcctcaccaaaaggcagatatttagggat
gttttcttggaattcgatcctgttgcagtttccaagttgaatgagaagaagattgttgca
cctggaagcagtggtagctcccttttgtcggaaccaaagttgcgagctatcattgagaat
gcacgccaaatactcaagataatcgatgagtttggatcatttgataaatactgctggagc
tttgttaactacaaacctatcatcagcagattccgctaccctcgtcaggtgcccgctaag
actccaaaagcagatgtcataagcaaagatatggttcggcgaggccttcgcagcgtgggc
ccaactgtcgtatactccttcatgcaggctgctggactgacaaatgatcacctcattcgc
tgcttccggtttgaggagtgcataacagctgcttcccctagtccaaacgaagtccacgaa
gctacggtaccggttaacctcaaagccaaagagaacttactagatcagggactgatggaa
caaattgattcggaattgtcaagagccgtggaggagatgaatatttcctag
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