Zingiber officinale (ginger): 121976803
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Entry
121976803 CDS
T08725
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00500
Starch and sucrose metabolism
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
121976803
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
121976803
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
121976803
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Storage polysaccharide
121976803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_4_4
Glycos_transf_1
Motif
Other DBs
NCBI-GeneID:
121976803
NCBI-ProteinID:
XP_042385092
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Position
4B:132146862..132160084
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AA seq
1146 aa
AA seq
DB search
MAMSLQPQWALSCQITTSANTRVRVMPVLGLFSRSSLRYQEVRIKFIPCALASSDYSKRH
PKRILIPKTKASSTPRGFAPIARPLVGTSTQKRDQNDTEDKEPSHTPSSTLTDKIFTRDS
QAADKNFSGIPFTATIDTECDVPIVRSGNEEHGQGLGTQYVKVDHSDKIIENGEKIGQFN
EVERHVALGNDQIGGISISEKTSIADQQEEKPSNRENNSGKDDTDSGDSLLKHREEFDAL
KQRKQLEDLANENFSRGNKIFVTPEVVTQDQVIKVFLNQNLSVLATETEILIKGAYNGWK
WKFFTEKLQKTNLIGDWWACELYVPKEAYRVDFVFFNGADVYENNDYKDFSISVEGDMDE
TKFEEFLLEEKKKELERLAAEENEKKRLAEEQRQREAEKAAIESDRLQAKTQVEKRRQGL
HHVMKLASQSAHHVWQMEPSLFEGGDRIKLYYNRSSRPLAHASEIWVHGGHNNWSEGLSI
VRELSRSEKVDGDWWCVDVVVPDQAVVLDWVFANGPPGKAVCYDNNNLNDFHATVSKGMP
DELFWVEEEQRIFRKLQEDRRKKAEKIERVKAETKERTMKMFLLSHKHIVYTEPVDVQAG
KMVSIFYNPSNTVLNGKPEVWFRCSFNRWSHPKGPLPPQKTVLAENGSHHKITVKVPIDA
YMMDFVFSEKEDGGLYDNRNKMDYHIPVTGSITKEPPMHIIHISVEMAPIAKVGGLGDVV
TSLSRAVQDLGHKVDVILPNYNCMNLNNVKDFHYHSTFSWGGAEIKVMFGKVEGLSVYFL
EPQNGMFSVGCIYGRNDDGNRFGFFCHAALEFLLQSGFQPDILHCHDWSSAPVAWLFKEH
YIHNGLSNSQVVFTIHNLEFGIQNIARAMMFADKATTVSQTYSREISGNSAISPHLDKFH
GIVNGIDPDIWDPCNDQFIPVSYTSENVMEGKRAAKDALQQRLGLKRSDLPLVGIITRLT
VQKGIHLIKHAVWRTLEQNGQVVLLGSAPDPRIQNDFVNLGNQLHNSHADRARFCLTYDE
PLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSVPIVRKTGGLYDTVFDVDNDKERAQA
QGLEPNGFSFEGTDAGAMDSALNRAFPAWSNAREWFYSLCKRVMEQDWSWNRPALDYMEL
YHSTRS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtctctacagccgcagtgggcgctatcttgccagataacgacctcggcgaac
acccgggtcagggtgatgccggttctcgggcttttctcccgttcatcactaaggtatcaa
gaagttagaatcaaatttataccttgtgcgctggcaagttcagactattctaaaaggcac
cccaaaaggatcttgatcccaaagacaaaggcttcttctactccaagaggatttgctcct
atagctagaccattggtaggaacgagcactcaaaaaagagatcaaaatgacaccgaagac
aaagaaccatcgcatactcctagcagtacactaaccgataaaatatttactagggattca
caagcggctgataaaaatttctcaggcatcccttttactgctacaattgatactgaatgt
gatgtacctatagtgcggtctggcaatgaagaacatggacaaggtctgggaactcagtat
gtaaaagttgatcatagtgacaaaataatagaaaatggggaaaagattggccagttcaat
gaagtggaaaggcatgtggcccttggtaatgatcagataggcggaatatcgatatcagaa
aagacatcaatagctgatcaacaggaggaaaaacccagtaaccgtgaaaataattctggt
aaagatgacactgattctggggactcattactcaaacatagagaagaatttgatgcactc
aaacaaagaaaacaattggaggatcttgctaatgaaaacttctcaagaggtaataaaata
tttgtgactccagaagtggtgactcaagaccaagttatcaaagttttcttgaaccaaaat
ttatctgtattggcaactgaaactgaaattttaatcaagggtgcttacaatggttggaaa
tggaaattttttacagagaaattgcagaaaaccaatcttataggagattggtgggcttgt
gaactctatgtgcctaaggaggcatatagagtggattttgtatttttcaatggtgccgat
gtatatgagaataatgattataaagatttctccatatctgtggaaggtgatatggatgaa
actaaatttgaagaattcttgcttgaagaaaagaagaaggagcttgaaagacttgctgcc
gaggaaaatgaaaagaaaaggctggcagaagagcagcgccagagggaagcagaaaaagct
gcaattgagtctgacagattacaagcaaagacacaagtagagaaaagaaggcagggattg
catcatgtaatgaaattggcttcacaatcagctcaccatgtatggcaaatggagcctagt
ttatttgaaggcggtgacaggattaaactgtattataacagaagttcacgcccacttgcc
catgcttcagagatttgggttcatggaggtcacaacaactggagtgaaggactgtctatt
gtcagggaactttcccgttctgagaaagttgatggtgattggtggtgtgttgatgttgtc
gtgcctgatcaagcagtggttctggattgggtttttgccaatggaccaccaggaaaggca
gtttgttatgacaacaacaaccttaatgactttcatgctactgtatcaaagggcatgcct
gatgaacttttctgggttgaagaagagcaacgaatcttcagaaagcttcaagaagacaga
agaaaaaaggctgaaaaaattgagcgcgtgaaagctgaaacaaaggaaaggacaatgaaa
atgtttttgttgtctcataagcatatagtgtatactgaaccagttgatgttcaagctgga
aaaatggtctccattttttataatccatctaatactgtcctaaatggaaagcctgaagtt
tggtttaggtgttcattcaaccgttggagtcaccctaaaggacctctaccacctcaaaaa
acggttctggcagagaatggttcacaccataaaataactgttaaggtccctattgatgcc
tatatgatggattttgttttctcggagaaggaagatggcggactctatgataacagaaat
aagatggattatcatatacctgtcacgggaagcattacaaaggaaccacctatgcacatt
atccatatttctgttgagatggcacctattgcgaaggttggtggtcttggggatgttgtt
actagtctttctcgggcagttcaagatttgggccataaagttgatgttattcttccaaat
tataattgtatgaatcttaacaatgtgaaagacttccattaccacagcaccttttcttgg
ggtggggcagaaataaaagttatgttcggcaaggttgagggcctttctgtatatttttta
gagccacaaaatgggatgttctcggtggggtgcatatatggtagaaatgatgatgggaac
agattcggtttcttttgtcatgctgccctggagtttcttcttcaaagtggatttcaacct
gatattttgcattgccatgattggtccagtgctcctgtagcatggttatttaaagaacac
tacattcacaacggactgagtaattctcaagtagtttttacaattcataatcttgagttt
gggatacagaacattgccagagcaatgatgtttgctgataaggctacgactgtatcccaa
acatattctagagagatttctggaaattctgcaatatctcctcatctcgacaagttccat
ggtattgtaaatggaattgatccagatatctgggacccatgcaatgatcagttcatcccg
gtgtcgtacacatcagaaaatgtgatggaaggtaagagggctgctaaagatgcattgcaa
caaagactaggattgaagagatcagaccttcctttagtaggtattattacccgcttaaca
gttcagaagggaattcacctgatcaaacatgctgtttggcgaacacttgaacaaaatgga
caggttgttcttcttggttcagcaccagatcctcgtattcagaatgattttgttaacttg
ggaaatcaattgcacaattcacatgctgatcgtgcacgcttttgcttgacgtatgatgaa
cctctttcacatctgatttatgctggtgcagactttattcttgttccatctatttttgaa
ccctgtggattgacccaacttattgctatgagatatggctctgttcctatagttcgtaaa
acaggaggactttatgatactgtattcgacgttgacaatgataaagaaagagctcaagca
caaggccttgaaccaaatggattcagctttgaaggaactgatgccggtgccatggactct
gccctcaacagagccttccctgcttggtccaatgctcgggagtggttctactcgttatgc
aagcgtgtgatggagcaagactggtcctggaatcggcccgcactggactacatggagctc
taccattccaccaggagctaa
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