Zingiber officinale (ginger): 121979370
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Entry
121979370 CDS
T08725
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00730
Thiamine metabolism
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
121979370
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
121979370
Enzymes [BR:
zof01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
121979370
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
PFOR_II
Motif
Other DBs
NCBI-GeneID:
121979370
NCBI-ProteinID:
XP_042387297
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All DBs
Position
5A:complement(5912948..5915953)
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AA seq
751 aa
AA seq
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MEAAASSLLSVSPVSFARIRSSSSSSLPRRRIQFSVRACAAASGGDAGSSGEGKIVKAKE
KGEWKLDYSGEKPPTPILDTINYPVHMKNLSKQDLEQLAAELRTEIVFTVSKTGGHLSSS
LGVVELAVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSKMHTIRQTNGLAGFPKRDES
EHDAFGAGHSSTSISAGLGMAVARDLQGKKNHVISVIGDGAMTAGQAYEAMNNAGYLDSN
LIIVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKFRMLREAAKVEIELSVLLPR
IFTLFCSELIGFFFFFGRFQNITKQIGGQTHEIAAKVDEYARGIMSNTSSSLFEELGLYY
IGPVDGHDVEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGYEPAVAAADRMHGVVKFDPKT
GKQFKTPSPTLSYTQYFAESLIAEAEADDKIVAVHAAMGSGTGLNYFQKRFPEKCFDVGI
AEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKIPVRFAVDRAGLVGADG
PTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGVGVPLPE
GNKGTPLEVGKGRILIEGSRVAILGYGSIVQTCLKAAESLRELGVAATVVDARFCKPLDA
ELIRRLAKEHEILITVEEGSIGGFGSHVTHFLSLNGLLDGNLKLRSMVLPDRYIDHGAPQ
DQIEAAGLSSRHIAGTALNLLGRTKEALHLQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagccgcgagctctctcttgtccgtttcgccggtctctttcgcgagaatccga
agcagctcttccagctcacttcctcgcagaagaattcagttttcggtgagagcttgcgcg
gcggcgtcaggcggcgatgcgggcagcagcggggaggggaagatcgtgaaggctaaagag
aagggggagtggaagcttgattactccggcgagaagccgccgactcctattctcgacacc
atcaactaccctgtccacatgaagaatctctccaagcaggatttggagcagctggcggcg
gagctgaggacggagatcgtgttcacggtgtcgaagaccggcggccacctgagctccagc
ttgggagtggtggaactggccgtggctctccaccacgtgttcaacacccccgacgacaag
atcatttgggacgtcggccaccaggcttatcctcacaagatactcaccggaagaaggtcg
aagatgcacaccatcaggcaaaccaacggcctcgccggattccccaagagagacgagagc
gagcacgacgccttcggcgccggccacagctccaccagcatctccgcagggctcggaatg
gcggttgcgagggatctgcaagggaagaagaaccatgtgatctcggtgatcggagacgga
gccatgacggccggccaagcctacgaggccatgaacaacgccggctacttggattccaat
ctcatcatcgtgctgaatgacaataaacaagtttcgcttccgaccgccactctcgacgga
cctgcgacgcccgtcggggcgctcagcaaggcgctcaccaagctccaatccagcaccaag
ttccgcatgctccgggaagctgccaaggtagaaatagaattaagtgttcttcttcctcga
attttcactctgttttgcagcgaattgattgggttcttcttcttcttcggtcgttttcag
aacattacgaagcagatcggtgggcaaacgcacgagatcgcggcgaaggtggacgagtac
gctcggggaataatgagcaacacgagttcttccctgttcgaggagctcggcctgtattac
atcgggccggtggacggacatgatgtcgaagacttggtgaccatcttcgagaaggtgaag
tcgatgccggcgccggggccggtgctcatccatatcgttaccgagaaggggaagggctac
gagccggcagtggccgccgccgacaggatgcacggcgtcgtgaagttcgaccctaagaca
gggaagcagttcaagaccccgtcgcccaccctctcgtacacgcagtacttcgcggagtcg
ctgatcgcggaggcggaggcggacgacaagatcgtggcggtgcacgcggcgatgggcagc
ggcacggggctcaactacttccagaagcggttcccggagaagtgcttcgacgtggggatc
gcggagcagcacgcggtgacgttcgccgccggcctggccaccgagggcctcaagcccttc
tgcgccatttactcctctttcctgcagcgcgggtacgaccaggtggtgcacgacgtcgac
ctgcagaagatcccggtccgcttcgcggtcgaccgggcggggctggtcggcgccgacggg
ccgacgcactgcggcgcgttcgacatcacctacatggcgtgcctgcccaacatggtggtg
atggcgccgtcggacgaggcggagctgatgcacatggtggcgacggcggcggcgatcgac
gaccgcccgagctgcttcaggttcccgagggggaacggcgtgggcgtgccgctgccggag
gggaacaaggggaccccgctcgaggtgggaaagggtcggatcctgatcgaggggagcagg
gtggcgattctcgggtacggatcgatagtgcagacgtgcttgaaggcggcggagtcgctg
agggagctcggagtggcggcgacggtggtggacgcccggttctgcaagccgctggacgcg
gagctgataaggaggctggcgaaggagcacgagatcctgatcacggtggaggagggctcc
atcggagggttcggctcgcacgtcacccacttcctgagcctcaacggcctcctcgacggc
aatctcaagttgaggtcgatggttctgccggaccgctacatcgaccacggcgcgccgcaa
gaccagatcgaggcggcgggcctttcttcacggcacatcgccggaacggcgctgaacctt
ctggggaggaccaaggaagcgctgcacctgcagtga
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