Zingiber officinale (ginger): 121980389
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Entry
121980389 CDS
T08725
Name
(RefSeq) ABC transporter B family member 6-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121980389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121980389
04147 Exosome [BR:
zof04147
]
121980389
04090 CD molecules [BR:
zof04090
]
121980389
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121980389
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121980389
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121980389
CD molecules [BR:
zof04090
]
Proteins
121980389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
121980389
NCBI-ProteinID:
XP_042388338
LinkDB
All DBs
Position
5A:complement(30616247..30657047)
Genome browser
AA seq
1401 aa
AA seq
DB search
MMGSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYTEGGADPVAPEDEGGAEDMEEIEPPP
AAVPFSRLFAYADRVDWVLMAVGSVAAAAHGVALVIYLHLFGQGIHLLRYESPRSGLHHD
GDLLLRKMKDHVLYIVYISISVLVAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFF
DTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLIIGLVNCWQIALLTLASG
PFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAISYIRTLYAFTNETLAKYSYATALQ
ATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLISHHKANGGEIVTALFAVILSG
LGLNQAATNFYSFEQGRIAAYRLFEMISRSNSSINQEGSNLASVQGNIEFRNVYFSYLSR
PEIPILSGFFLTIPARKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE
WLRSQIGLVTQEPALLSLSIRDNIAYGRSATSDQIEEAAKTAHAHGFISSLAMGYETQVG
KAGLTLTEEQKIKISIARAVLSNPSILLLDEVTGGLDFEAESAVQEALDILMLGRSTIII
ARRLSLIRNADYIAAMEEGQLVEMGTHDELLSLDGLYAELLRCEEAAKLPKRTPIRNYKD
SNLQTEKASSGSHSLQEPSSPNLSKSPSLQRGQDLHLCKQQDASYNSHESSKTHSPPPEP
RVENGMVSEKCPSIKRQDSLEMRLPELPKLEVHSINRQSSKTSDPESPISPLLTSDPKNE
RSHSNTFSRPLNPFDMVHVKKKEANDFQQQKPPSFWRLVELSFAEWFYALLGSIGAAIFG
SFNPLLAYAIALIVAAYYRIGDRDVHDEVNRWCLIIACMGIITVVANFLQHFYFGIMGEK
MTERVRRMMFSAILHNEVEWFDEEENSADTLSMRLANDATYVRAAFSNRLSILVQDIAAV
AVAFLIGLLLDWRVALVALATLPILTVSAVAQKMWLAGFSKGIQEMHRKASLVLEDAVRN
IYTVVAFCAGNKIMELYRLHLSTILKQNFILGMAIGFAFGFSQFLLFACNALLLWYTAMS
VHNGRIKIETALKEYIVFTFATFALVEPFGLAPYILKRRKALTSVFEIIDRVPKIDSDDN
AGISPPNIYGSIEFRNVDFFYPTRPEAMILSNFSLKVSGGQTVAVVGVSGSGKSTIISLI
ERFYDPVCGQILLDGRDLKLFNLRWLRGHMGLVQQEPVIFSTTIRENIIYARHNATESEM
KEGARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSA
IESESSRVVQEALDTLIIGNKTTILIAHRAAMMRHVDNIVVINSGRIVEQGTHESLLQKN
GLYVRLMQPHFGKGLRQHRLV
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctccagggggttgttcgggtggtctccgccccacgtacagcccctgactccg
gtttccgaggtgtcggagccacctgaatccccctcgccgtacacggagggcggggccgac
ccggtggccccggaggacgagggcggtgcggaggacatggaggagatcgagccgcctccg
gccgcggttccgttctctaggctatttgcctatgcggaccgggtcgattgggtgctgatg
gcagtcggctccgtcgcggcggccgcgcacggggtcgcgctggtgatctacctgcatctt
ttcgggcaaggcatccatttgttgcgctacgagagcccgagatccggcttacaccatgac
ggtgacctgctgttaaggaaaatgaaggaccatgtgctgtacatcgtttatatttctatt
tctgttctggttgctggttggatagaggtctcttgctggattctcactggagagaggcag
accgcagtcataaggtcaaagtatgtccaggtcttactaaaccaagacatgagtttcttt
gatacatacgggaacaatggagatatagttagtcaagtactgagtgatgtcctgctcatt
cagtctgctctaagtgagaaggttggaaactatattcataacatggcaacgttctttggt
ggccttatcattggtttggttaactgttggcagatagcacttctaaccctagcaagtggt
ccttttattgttgcagctggaggaatatctaatatttttctccacaggcttgctgaaaat
attcaagatgcatatgccgaagcagcaagcatagcagaacaggcgatctcatacattagg
acattatatgccttcacaaatgaaacacttgcaaagtattcctatgcaaccgcacttcag
gctacgctgagatatggtatattgattagtcttgtacaaggccttggtcttggattcaca
tatggacttgctatatgttcttgtgctttacaactttgggttgggaggttccttatatca
catcacaaagctaatggtggtgagatcgtgacagctctatttgctgtaattttaagtgga
cttggattaaatcaagcggctacaaacttctattcatttgaacaaggaagaattgctgca
tatagactttttgagatgataagccgttcaaactcttctattaatcaggagggaagcaat
ctagcttcagtgcaaggaaatattgagttcaggaatgtatatttcagttatctttctcgg
ccagaaattcccatattgagtggtttcttcctaactatacctgctagaaaggctgtggct
cttgttgggcgcaatggttctggaaagagcagcattattcctctgatggagcgattctat
gatccaacacttggtgaagttcttttggatggggagaatataaaaaatttgaagctggag
tggttaagaagccaaataggactagttacccaggagcctgctttgttaagtttgagcatc
agggataatattgcttatggaagatctgctacttctgatcagattgaggaggccgccaaa
acagctcatgcacatggattcattagttcccttgcaatgggatacgaaacacaggttggc
aaggctggtttaacattgacggaagaacaaaaaataaagatttcaattgctcgtgctgtg
ctttcaaatccgtccatacttttactggatgaggtcacaggtggacttgattttgaggca
gaaagtgctgttcaggaagctttagatattctcatgttgggaaggtccactataataata
gccagacgccttagtcttatccgtaatgctgactatattgcagcaatggaagaaggtcaa
cttgtggaaatgggtactcatgatgagctattgagccttgatggcctgtatgctgaactt
ttgagatgtgaggaggcagcaaagcttcctaagaggacacccatcagaaattataaagat
tcaaatcttcaaactgagaaggcttcatcaggatctcatagtctccaagaaccatcatct
cctaatttgtcaaagtcaccttctcttcagagaggacaagatcttcatttatgtaaacag
caagatgctagttataactcacatgaatcatcaaagactcatagcccacctccagaacca
agggtggaaaatgggatggtgtctgaaaaatgtccatctatcaaaagacaggacagctta
gagatgagattgcctgagcttcccaaactagaggttcattccattaacaggcaatcttca
aaaacatcagacccagaatctcctatttccccgcttctcacatctgaccctaaaaatgaa
cgttctcattcaaatacattcagccgcccacttaatccgtttgatatggtgcatgttaaa
aagaaagaggcaaatgattttcaacaacagaaacctccatcattttggcggcttgtggaa
ctcagttttgctgaatggttttatgctcttctaggaagcattggtgctgcaatttttgga
tcattcaatcctctccttgcttacgctattgcacttatagtagcagcctattatagaata
ggcgaccgtgatgttcacgacgaagtaaataggtggtgcttgatcattgcctgcatgggt
atcattacagtggttgcaaactttttgcaacacttctactttggtataatgggggagaaa
atgactgaacgagttaggaggatgatgttctctgcaattttgcacaatgaggttgagtgg
tttgatgaggaagagaatagcgcagatacattgtcaatgcgattagctaatgatgcaacc
tatgttcgtgctgcgttcagcaaccgcctttctatattagtacaagatattgctgctgtt
gctgtagcgtttcttataggtttgctgttagattggcgtgtcgcacttgttgcactggca
actcttcccattctaacagtttctgctgttgcacagaaaatgtggcttgctggattttca
aagggaattcaagagatgcataggaaagcctctttggtccttgaggatgcagtacgaaat
atttatactgttgttgccttttgtgctggtaacaagattatggagttgtacagattgcat
ctttctaccatactgaaacagaatttcatccttggaatggcaattggttttgcttttggc
ttctcgcagttccttctttttgcctgcaatgctcttcttctttggtacacagctatgtca
gtacacaatggacgaatcaaaatagagacagctcttaaagagtacattgtctttactttt
gcaacctttgctttggtggagccatttggtcttgcaccttacatactaaagcgacggaag
gctcttacttcagtatttgaaatcatagatcgtgtaccaaagattgattcggatgacaat
gctggtataagccctcccaatatatacggaagcattgagttcagaaatgtagatttcttt
tacccaacacgaccggaggcgatgattctaagtaatttcagtcttaaggtgagtgggggg
caaacagtagcagtagtgggggtatcagggtctggaaagagcacaataatatcactaatt
gagagattctatgaccctgtttgtggtcaaattttgttggatggacgagatctgaagctt
tttaacttgagatggctgcgtggccacatgggtctggttcaacaggaaccagttatattt
tcaacaaccataagggagaatataatttatgcacggcacaatgcaactgagtctgagatg
aaagaaggtgcaaggatcgcaaatgcacaccatttcatcagcagcttgccacatggttat
gacactcatgtgggcatgagaggggttgatttgactcctggacagaaacaaagaattgcc
attgctagggtggtactaaagaatgcacctatactgttgttggatgaggcaagctctgca
atagaatccgagtcaagtcgcgtggtgcaggaagcacttgacacattgatcatagggaac
aagacaaccattcttatcgcacatagggcagcaatgatgaggcatgtggacaatattgtg
gttataaatagtggtaggatagttgagcagggcacccacgagtcattgttgcagaagaat
ggattgtatgttaggttgatgcagccacatttcggaaagggccttcgtcagcatcgactt
gtttag
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integrated database retrieval system
