Zingiber officinale (ginger): 121980726
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Entry
121980726 CDS
T08725
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121980726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121980726
03051 Proteasome [BR:
zof03051
]
121980726
Membrane trafficking [BR:
zof04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
121980726
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121980726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Rad60-SLD_2
Dsc3_N
Med15_fungi
Motif
Other DBs
NCBI-GeneID:
121980726
NCBI-ProteinID:
XP_042388838
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All DBs
Position
5A:complement(80784582..80790559)
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AA seq
533 aa
AA seq
DB search
MAADGESGGAVPASATIHIRCSNGSKFSVQAALDEMVGAFKAVVASSCDVPAEQQRLIYK
GRILKDDHTLASYGVESDHTIHMVRGGAPSAVPTNKVVNNQGVSRATDTNPSSTFGGSLS
PGLSVNGLSGSGTAGLLGAGFPELDQMQQQLSQNPNIMREIMNMPAMQNLISNPDIIRNL
FMNNPQMREIIDRNPELAHVLNDPNTLRQTLEAARNPELMREMMRNTDRAMSNIESSPEG
FNMLRRMYETVQEPFLNATTMGGDSGVDIGSNPFAALLRNQGAGRGSGRETSADSTLSSE
PTTGTVPNANPLPNPWGANSGGSQPVNTQSTAATAPTTRGLTGLGSLDLENMVGRMQDPS
MLSQILQNPAMTQMMQNLLSDPQYVNQMLNSNSNVRSLLESNTQLREMMQNPDFIRQLMS
PETMQQLLSFQQSLFSHIGRQQSTTEQEQTGRGTGTQNNTGMEFLMNMFGGLGTGGLGIP
NPSNVPPEELYATQLSQLQEMGFYDTQENIRALTATAGNVHAAVERLLGNPRQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgatggagagtccggcggagcggtccctgcctccgccaccatccacatccgg
tgctccaacggctccaagttctccgtgcaggcggcgctcgacgagatggtgggcgcgttc
aaggccgtcgtcgccagcagctgtgacgtgccggcggaacagcagcggctgatttacaag
ggaaggatcttgaaggacgaccatactctcgcgagctacggtgttgaatcagatcatacc
attcacatggttcgtggtggtgctccttctgctgtgccaactaacaaagttgtgaataac
caaggtgtttcaagagcaacagacactaatccatcatctacttttggaggttccctttct
ccgggcttgagtgttaatgggttatctggtagtgggacagctggtttattgggagctgga
tttccagagcttgatcagatgcagcagcagcttagtcagaaccctaatattatgagggaa
attatgaatatgcctgccatgcagaatctcattagcaatccagatataatccgcaatctt
tttatgaacaatccccaaatgcgtgaaattattgaccgtaatcctgagcttgcgcatgtc
ctcaatgatccaaatactctgaggcagacacttgaggcagcaaggaatcctgaactcatg
agggagatgatgcgtaacactgatagggcaatgagcaatatcgaatcatctcctgaagga
ttcaacatgctacgacgcatgtatgaaactgttcaggagccatttcttaatgcaaccact
atgggaggcgactcaggggttgacataggatccaacccatttgctgctcttctcagaaat
cagggtgctggacgtggcagtggcagagagacgtcagcagattccactcttagttcagag
ccaacaactgggactgtacctaatgccaatcctcttcctaacccttggggtgccaactct
ggagggtcacagccagtcaatacacaatcaactgctgcaactgcaccaacaactcgtggg
ttaactggtcttggttcactggatttagaaaacatggttggcaggatgcaagatccatcc
atgttaagtcagattttgcaaaatcctgctatgacgcagatgatgcaaaatctcctttct
gatcctcagtatgtgaaccagatgcttaattcgaactccaatgtgcgaagtttattggaa
tcaaatactcagttaagagagatgatgcaaaacccagattttatacgccagcttatgtca
cctgaaacaatgcagcaacttttatcttttcaacaatctctgttctcccacattggtcgg
cagcagtcaaccacggagcaagagcagacaggtcgaggcactggcacacaaaacaacaca
gggatggagttcctgatgaacatgtttggtgggcttggcacaggaggtcttggcatcccc
aacccttcaaatgtccctccagaagaactttatgcgactcagttatctcagcttcaagaa
atgggattttacgatacacaagagaacatccgagcgctaactgccactgcagggaacgtc
catgctgctgtcgagcgactgcttgggaatcccaggcagtaa
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