Zingiber officinale (ginger): 121980838
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Entry
121980838 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
121980838
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121980838
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
121980838
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121980838
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121980838
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121980838
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121980838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
zf-UBP
UBA
UCH_1
UBA_4
CUE
Motif
Other DBs
NCBI-GeneID:
121980838
NCBI-ProteinID:
XP_042389015
LinkDB
All DBs
Position
1B:135849733..135861229
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AA seq
793 aa
AA seq
DB search
MELLRSHLSRVRIPEPTNRIYKNECCVSFDTPRSEGGLYVDMSSFLAFGKEYVGWNYEKT
GNPVYLHIQQRPKPVPEDRPLKKPTLLAIGVEGGFDYQEIEYEETHNIVILPEYVSLPFP
SVELPEKIRLAVDAVLLAEGAERKEQLAAWTAEKKKVSTYALGLQQINNGVVVPPSGWKC
CKCNKSDNLWLNLTDGMILCGRRNWDGSGGNNHAIEHYKETNFPLAVKLGTITADLESAD
VFSYPEDDTIEDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQEVE
LLFGPGYTGLLNLGNSCYMASTIQVVFTTHAFNARYHKNQSLKKAFAMAPSDPTLDLNMQ
LAKLAHGLLSGKYSLPVQQKQEGVPPRMFKMVIAASHPEFSSMRQQDALEFFLHFLDQVE
RANTGNPALDPSRSFKFVIEERLQCPSGKVAYNKRSDYILSLNIPLHEATNKEQLEAFNK
TKAEKKAEGKDLDSGEIVRPRVPLEACLASFSSTEEIHDFYSSALNTKTTAIKTAGLATF
PDYLVLHMRKFVMEEGWVPKKLDVYIDVPDVIDITHMRSKGLQPGEELLPETGPTGEVES
TQLVASEDIVSKLAAMGFNYLHCQKAAINTANAGVEEAMTWLLSHMDDPDIDEPISHNSH
AMELQSVDETSVETLISFGFHEEVARKALKASGGNIEKATDWIFSHPEASSSMDTDATSN
GMQDSDPGVPDGSGRYKLMAFISHMGPSTHCGHYVAHVHKDGKWVIFNDSKVGASVDPPK
DMGYLYFYERIVD
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagcttctccgctcccacctctccagagttcgcatcccggagcccaccaaccgcatc
tacaagaacgagtgctgcgtctccttcgacacaccgagatcggaagggggtctctacgtt
gatatgagttcgtttcttgcgtttgggaaggagtacgttggctggaactacgaaaagaca
gggaacccagtttaccttcacatacagcagcgaccgaagcctgtgcctgaggaccggcct
ctaaagaaaccaactctgcttgcgatcggtgtggagggaggatttgattatcaggaaatt
gaatatgaagaaactcacaatattgtaatattgcctgaatatgtgtctctaccatttcct
tctgttgagttgccagagaaaattaggctagcagttgatgcagttttgttggctgaaggt
gctgaacgcaaagaacagttagcagcttggactgcggagaagaagaaagttagtacttat
gcattaggtctgcaacagattaataatggtgttgttgtgcctccatctggatggaaatgt
tgcaaatgcaataaatctgataatctgtggctgaatttaactgatggaatgatactttgt
ggtcggagaaattgggatggaagtggtggcaataatcatgccatcgaacactacaaggaa
acaaattttcctctagctgtgaaacttggtaccataactgcagacttagaaagtgcagac
gttttctcataccccgaggatgataccattgaggatcctttattagctcaacacctggct
ttttttggtatcgatttctcatcattgcaaaagactgaaatgactactgctgaaagggaa
cttgaccaaaacacaaattttgactggaatcgtatccaggaaagtgggcaggaggtggag
ctcttatttggaccaggctatactggtcttcttaaccttgggaatagttgttatatggca
tcaacaattcaagtggtgtttacaactcatgctttcaatgctagatatcacaaaaaccaa
agtctgaagaaggcttttgctatggctccctctgatccaacactggacttgaatatgcag
ctggctaaactagcacatgggttgctttctggcaaatattctttgccagttcaacagaag
caagaaggcgtccctcctcgtatgttcaaaatggttattgctgctagtcatcctgagttt
tcaagtatgagacaacaggatgcactcgagttttttctgcattttcttgaccaagttgaa
cgcgccaatactggaaatcctgcattggatccttcaaggagtttcaagtttgtaattgaa
gagagacttcagtgcccctctggaaaagttgcttataacaaaagatcagattatattctt
tctttaaatataccgctacatgaggctactaacaaagaacagcttgaagccttcaataag
accaaagcagaaaaaaaggcagaagggaaggacctagatagtggtgaaattgtaaggcca
agagtcccgttggaagcatgccttgctagtttttcatctactgaagagattcatgacttt
tatagttcagcattaaacaccaagacaactgcaatcaagactgctggtttggctactttt
cctgattacctggttttgcacatgaggaagtttgtgatggaagaaggatgggtgccaaag
aagctagatgtttatattgatgtacctgatgtaatcgatatcacacatatgcgcagcaaa
ggtttgcagccgggagaagaattactgccagaaacaggtcccactggggaagttgaatcc
acccaactagttgctagcgaggacatagtttccaaacttgctgctatgggcttcaattac
ctccattgtcaaaaggctgccataaacactgctaatgctggagttgaggaagcaatgacg
tggttactttctcacatggatgatccagatatagatgagcctatttcacataactctcat
gcaatggaacttcaatctgttgatgagacaagtgttgaaactttaatttcatttggcttc
catgaagaggttgctagaaaggcattaaaggcatctggagggaacatagagaaagctaca
gattggatatttagtcaccctgaggcctcaagctcaatggatacggatgcaacctcaaac
ggcatgcaggatagtgatcctggagtaccagatggaagtggaagatacaagctcatggca
tttattagtcacatgggcccttccacccactgtggccattatgtggctcatgtacataaa
gatggtaaatgggtaatattcaacgacagcaaagttggagcctctgtggatccaccaaaa
gacatgggatacttgtacttctacgagagaatagttgactaa
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