Zingiber officinale (ginger): 121982288
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Entry
121982288 CDS
T08725
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121982288
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
121982288
04147 Exosome [BR:
zof04147
]
121982288
04090 CD molecules [BR:
zof04090
]
121982288
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
121982288
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
121982288
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121982288
CD molecules [BR:
zof04090
]
Proteins
121982288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
RsgA_GTPase
AAA_21
DEAD
Zeta_toxin
SbcC_Walker_B
AAA_15
DUF87
AAA_7
DUF815
AAA_30
Motif
Other DBs
NCBI-GeneID:
121982288
NCBI-ProteinID:
XP_042391213
LinkDB
All DBs
Position
1B:complement(140285103..140290857)
Genome browser
AA seq
1274 aa
AA seq
DB search
MELEGKEGVVPTGFVGSEENSKSMGKDKIQDDNKNTVPFYKLFSFADSVDIILMILGSLG
ALGNGIALPLMTVLFGGLIQAFGGASDFHDVLGRVTKVALEFVYLAVGAGVASFLQVACW
MTTGERQSSRIRNMYLKTILRQEIAFFDMETNTGEVVERMSGDTVFIQDAMGEKVGKFIQ
LLSTFFGGFTVAFAQGWLLTLVMLSVIPPLVVAGGVVANVVAKMASRGQAAYGEAANIVE
QTIGSIRTVASFTGERVAVKKYENSLVSAYDASVQEGLVTGLGLGTVVLFMFGGYSLGVW
YGAKLILSKGYTGGRVLNVIFAILTGSFSLGQLAPCMKAFAAGQAAAYKMFETINRKPEI
DAYDDKGKMLDDIQGNIEFRDVYFSYPARPNEQIFHGFTLVIQQGTTVALVGESGSGKST
VISLIERFYDPQGGEVLIDDINLKEFQLRWIRGKIGLVSQEPVLFATSIGNNIAYGKDNA
TIEEIRAAAELANVAKFVDKLPKGLDTVVGEHGTQLSGGQKQRVAIARAILKNPRILLLD
EATSALDAESERTVQEALDRVMANRTTVVVAHRLSTIRNADTIAVIRQGSIVEQGSHSEL
LKDPHGAYSQLIRLQEVNQDSDSINGHELHKENKFSGRTLSFHHSSSRGSSGRHSNSHAL
RITHGFDVGADVQDIITHKADPEILTQDLKEVPLRRLSYLNKPETPMLILGSIAAIANGI
IFPVLGILISNVIEAFYEPPNKLKKDSNFWSLMFLVFGGLSLVSLPARSYFFVVAGSKLI
RRIRLMTLEKVVNMEIAWFDNPENSSGAIGARLSADAATLRSLVGDALGLTVENITTLVA
GLLIAFLANWQLSLIILALVPLLVLNGFVQMKFVKGFSKDAKIMYEEASQVANDAVGSIR
TVASFSAEEKVMQIYKQKCEGPMSKGIRQGIVSGAGFGLSIFLLFCVYAASFYVGARLVN
NGKTTFDKVFRVFLALSMAAVGISQSSSYAPDSSKARSASASIFAILDGKSRIDPSDDSG
MTLERLEGSIEFRHVSFRYPSRPDIQIFQDLCLTIQSGKTVALVGESGSGKSTAISLLQR
FYSPDSGDILLDGIEIQRLQLRWLRQQMGLVSQEPILFNDTIRANIAYGKEGMASESEIT
AAAELANAHRFISSLQKGYETLVGERGVQLSGGQKQRVAIARAIVKEPRILLLDEATSAL
DAESERAVQDALDRVMVDRTTVVVAHRLSTIRGADVIAVVKNGMIVEKGKHESLINVKDG
VYASLVALHLTACS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgaaggcaaagagggagtcgtacctactggttttgtggggtctgaagagaat
agtaaatccatgggcaaggacaagattcaagatgataacaagaacaccgttccattctac
aagctcttctcattcgcggactccgtggacataattctgatgattcttggatcactaggc
gctctggggaatgggattgctctgcctctcatgactgtcttgtttggaggtttgatacag
gcctttggaggagcttcagactttcatgatgtgcttggtagagttaccaaggtagcgttg
gaattcgtgtacttggctgtaggagcaggcgtggcatcattcctccaggtggcttgctgg
atgactactggggaaaggcaatcttctagaataagaaatatgtacctgaagacaattcta
cggcaagaaatagcattctttgacatggaaaccaatactggtgaagtcgttgagagaatg
tccggtgacactgtctttattcaggacgccatgggcgagaaggttggtaagttcatccag
ctactatccacattctttgggggattcacagttgcgtttgcccaaggttggcttctcact
cttgtcatgctcagtgtcatcccccccttggttgttgcgggaggagtcgtggccaatgtt
gtggccaagatggcgtcaaggggacaggcagcttatggggaagctgctaacattgttgaa
cagacgattggttcaattaggacagttgcttcttttactggggaacgagtggcagtgaag
aagtatgaaaactcattggtgagtgcctacgatgcgagcgtgcaagagggacttgttact
ggattaggacttggcacggttgtgctattcatgtttggtgggtattcattgggagtatgg
tatggagcaaaactgatactttcaaaaggttacacaggtggcagggtgctcaatgttata
tttgccatcctcactggatccttttcgttaggccagttagcaccctgcatgaaagctttt
gctgcaggacaagctgctgcttacaagatgtttgagacaatcaacaggaaaccagaaata
gatgcctatgatgacaaaggaaagatgcttgatgacattcaagggaatattgaatttaga
gatgtttattttagctatccagccagaccaaatgaacaaatctttcacggatttactcta
gtcattcagcaaggaacaactgttgcattggttggtgaaagcggaagcggaaagtcgact
gtcatcagtttgatcgagaggttttatgatccacaaggcggagaagttctcatagatgac
ataaacctcaaggaattccaattaaggtggattagaggaaaaatcgggctcgtgagtcaa
gaaccagtcctatttgctactagcattggaaataacatagcctatggcaaggataatgca
actattgaggaaatccgagctgctgcagagcttgctaatgttgccaaatttgtagataag
ttgcccaagggtcttgatactgtggtcggtgaacatggaacacagctatccggaggtcaa
aagcaaagggttgccatagccagagcaattctgaaaaatcctcgcattttactcttagat
gaggctacaagtgcccttgatgcagaatcagagaggacagtacaagaagcacttgataga
gtcatggcaaaccgtactactgttgtggttgctcatcgattgagtactatacgaaatgcc
gataccattgctgttatacgtcaaggatcaatagttgaacaaggttcacattcagagtta
ctaaaggatccgcatggagcttatagccaattaatacgcttgcaagaagtgaaccaggat
tcagatagtataaatggacatgaattgcacaaagagaataagttctcaggaagaacatta
tcctttcaccattccagcagccggggttcatctggaagacacagcaacagccacgcatta
cgaataacacatggttttgatgttggagcagatgtacaagacattataactcataaagca
gatcctgaaatcctcactcaagacttgaaagaagtacctctacgtcgattatcttatctt
aataaaccggagacaccaatgctgattcttgggtcaattgctgccatagctaatgggatc
atatttcccgtattaggaatactcatatcaaatgtgatcgaagcattctacgagccacca
aacaagctcaaaaaggactcaaatttttggtcattaatgttcctggtatttggtgggtta
tcgttagtttccctcccagccagatcttacttctttgtagtcgcaggatccaagttgatt
aggaggattagactaatgacattagagaaggtggttaacatggaaatagcatggtttgat
aatccagagaattcaagtggtgcgattggagcaagactatcagcagatgcagctacattg
aggagtcttgtgggtgatgcactcggattaactgttgaaaacatcacaacattagttgct
gggttgctgattgctttccttgcaaattggcaactctctttgattatcctagctttggtg
cctcttcttgttctaaacggattcgtccaaatgaagtttgtaaaaggatttagcaaggat
gcaaagataatgtatgaagaagcaagtcaagttgctaacgatgcagtggggagtatcaga
acagttgcttcattttcagccgaagagaaggttatgcaaatatataagcagaaatgtgaa
ggtccgatgagtaaaggaatccgacaagggattgtcagtggtgctggattcggtctttcc
atattcttattgttttgtgtctatgcagctagtttttacgtcggagcacggctagttaac
aacggaaaaaccacttttgacaaagtatttagggtcttccttgctctctcaatggcagct
gttggaatttctcagtcaagctcctatgcaccagattcctcgaaggccagatctgcttca
gcttccatatttgccattctagatggaaaatctagaatagatccaagtgatgattcaggc
atgaccttagaaagattggaaggcagcatcgagtttcgacatgtcagcttccggtaccct
tcgagaccggatatccaaatttttcaagatctttgcttgactatccaatccggcaagaca
gttgcactcgtcggggagagcggcagtggaaaatcaactgccatatcattgttacagagg
ttttactcccctgattctggtgatatacttctagatggaattgaaatccaaaggttacag
ctcaggtggctgaggcagcagatggggctagtgagtcaagaaccgattctgtttaacgat
acaattcgagctaacattgcttatggaaaggaggggatggctagtgaaagtgaaatcaca
gctgctgcagaactagcaaacgcccatagatttattagcagtttgcaaaagggctatgaa
acattggtcggggaacgaggagtgcagttatcaggcggccaaaagcaacgcgttgcgatt
gctcgtgcgatagtgaaggagcccagaatcttgctactggatgaggcaaccagtgctctt
gatgctgaatctgaaagagcagtgcaagatgctctggatcgtgtcatggtcgatcgaacc
acggtggttgtggcgcacagattgtcgaccataagaggtgctgatgttattgccgttgtc
aagaatggaatgatcgtcgaaaaagggaagcatgaatctttgatcaacgttaaggatggg
gtttatgcatccttggtggcacttcacctgactgcctgctcatga
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integrated database retrieval system
