Zingiber officinale (ginger): 121984188
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Entry
121984188 CDS
T08725
Name
(RefSeq) 3-isopropylmalate dehydratase large subunit, chloroplastic-like
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00290
Valine, leucine and isoleucine biosynthesis
zof00660
C5-Branched dibasic acid metabolism
zof00966
Glucosinolate biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01210
2-Oxocarboxylic acid metabolism
zof01230
Biosynthesis of amino acids
Module
zof_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
121984188
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
121984188
09110 Biosynthesis of other secondary metabolites
00966 Glucosinolate biosynthesis
121984188
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
121984188
4.2.1.35 (R)-2-methylmalate dehydratase
121984188
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Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-GeneID:
121984188
NCBI-ProteinID:
XP_042392943
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Position
5B:18401748..18409625
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AA seq
504 aa
AA seq
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MASLLNASSSAIFGAKKELCVAPCSSMAHRSRRHASNKVLAVMAPAQSPRTPSASGSVKH
AMTMTEKILARASEKSHLEPGENVWVNVDVLMTHDVCGPGTIGIFKKEFGQNAQVWDREK
IVIIPDHYIFTSDERANRNVDILRDFCLEQNIKYFYDIIDLSNFKANPDYKGVCHIALAQ
EGHCRPGEVLLGTDSHTCNAGAFGQFATGIGNTDAGFVMGTGKLLLKVPPTLRFVLDGEM
PNYLLAKDLILQIIGEITVAGATYKSMEFVGSTIQGLNMEERMTLCNMVVEAGGKNGVVP
ADEVTFKYLEDKTSKNFEPVYSDDNARFIQEYRIDVSKLEPLVAKPHSPDNRALARECKD
VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKRVKVPTFLVPATQKVWMDIYSLPVPGSGG
KTCSQIFEEAGCDTPASPSCGACLGGPRDTYARMNDPQVCVSTTNRNFPGRMGHKEGQIY
LASPYTAAASALSGYVTDPRDFLM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgcttaatgcttccagctctgcgatttttggagcaaagaaggaattatgc
gttgcgccgtgctcttcgatggctcatcgttcccgaaggcacgcctcgaacaaagttctt
gcagttatggcgccggcacaatctcctcgaactccgtcggccagcggttcagttaagcat
gcaatgacaatgacggagaagatccttgcgcgagcatcagagaagtcgcatttggaacct
ggtgagaatgtttgggtgaatgttgatgtcttgatgactcatgatgtctgtggccctggg
acgattgggatctttaagaaagaatttggtcagaatgcacaggtttgggatcgtgaaaag
attgttataataccagatcactacatatttactagtgatgaacgcgcaaacagaaatgtg
gatatcttgcgggacttttgcttggagcagaatattaaatatttttatgatatcatagat
ctaagtaactttaaggctaatccagattataagggtgtgtgtcacattgcacttgcacaa
gagggccattgcaggcctggagaggttttacttggcacagactcccacacatgtaatgct
ggtgcttttgggcaatttgctactggaattggtaatactgatgcaggttttgtgatggga
actgggaaacttctgctgaaggttcctcctactttgaggtttgtactggatggagaaatg
ccaaactacttacttgccaaggatttaattttacaaataattggcgaaataactgttgct
ggtgcaacatataaatcaatggaatttgttggatctactatccaaggactaaatatggag
gaaaggatgacattgtgcaacatggttgttgaagctggcggaaagaacggggttgtacct
gctgatgaagttacattcaagtatcttgaggataaaacttccaagaactttgagcctgta
tacagtgatgacaatgccagatttattcaagaatatagaattgatgtctctaagttggaa
ccattggttgcaaagccacattctcctgataatcgagctttagcaagagaatgcaaggat
gtgaaaattgatagagtctacataggttcttgcacaggcggaaagacagaggatttccta
gccgcggctaaagtgttcctagcttcaggcaaaagggttaaagttccaacatttctagtt
cctgccacacaaaaggtatggatggatatttatagcctccctgttcctggatctggtggg
aagacttgttctcagatattcgaggaggctggttgtgataccccagctagtccgagttgt
ggtgcttgcttgggtggtccacgagatacatatgctcggatgaacgatccacaagtttgt
gtatccaccacaaacagaaatttccccggcagaatgggtcacaaggaagggcagatatat
ctggcttcgccgtatacagctgcagcttcggctttgtctggatacgtcactgatcctaga
gatttcctcatgtag
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