Zingiber officinale (ginger): 121995402
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Entry
121995402 CDS
T08725
Name
(RefSeq) anaphase-promoting complex subunit 1-like
KO
K03348
anaphase-promoting complex subunit 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121995402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121995402
03036 Chromosome and associated proteins [BR:
zof03036
]
121995402
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Other subunits
121995402
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
121995402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC1_C
APC1_3rd
ANAPC1
PC_rep
Motif
Other DBs
NCBI-GeneID:
121995402
NCBI-ProteinID:
XP_042405084
LinkDB
All DBs
Position
6A:141246559..141293481
Genome browser
AA seq
1155 aa
AA seq
DB search
MSIGVRELSVLGEFKPFGLSVEDLDGKTLDDASSEHQYFLFHPEVAREGHGTASNLDFSS
PCTPSEGDHEIFIRGNQIIWSSGPRVHKRYTSTKAVIMVCWCHMEGISDALLCVLQSDVL
SIYGVSVGEHLKLYKWKLKKQYNSERSEQREEVDHVDPNTYQSCGSGGGNDHTKDDLCHP
SEAEPLISLERTVKNVEGEDEEAVAPSMVKTLCFCSHVGRKSTVEKSLLEMKLKRPTGIE
KKMLTALPASSSVEHLALATTSAKKSSDVETERKQEQPEKREEQPDSSVRNHVHGKPSES
RTTAGTLRSQKNPKMRSSPSPEPSEMSSSSENRGARGGIASLAIRDGSQPADRALAGHVE
DDRAIVGEYEEEHDITTVGMLLGMAASYRGTMHLEVSKMLYLHVPSRHQLSFPELELPTS
LQSAALVAIGLLYEGSAHPFTMKILLGEIGRRSAGDNVLEREGYAVAAGYALGLVALGRG
NDALGFVDRFVDRIFQYIGEKGVKNEKFSVVAQPAEDHVRILGQIVDGAHVNVDVTAPGG
TIALALIFMKTESEEIVSRLRLPISHYDLQYVRPDFIMLRVIARNLIMWSNMQPSIIWIE
SQIPDFIRLAVLKLDGASSDDDEFDAEAVVQAYVNIVSGACISLGLKYAGTKSEEARELL
YNYALYFLNEFKHIPAMANVLPKGLLHYVDRGTSEICLHLIILSLSLVMAGSGHLQTFRL
LRYLRGRGSTEGQINYGTQMAVSLAIGFLFLGGGMQTFSTGNSAVAALLITLYPRFPTGP
NDNRCHLQALRHLYVIAAESRRLQTVDVDTGLPVYCPIEITIKETEHYAESSYCEVTPCI
LPERCVLKTVHICGPRYWPQVIQVIPEEKPWWRFEDKSDPFNGGILYVKRKVGSCSYEDD
PIGCQSLLSRAMHKVFDMTDLDYANMRNSNNPVPDSYKMDQLVSTFSGDPSLIAFAQLCC
DSWRSRSDPNFQEFCSQLIFECVSKDRPALLQIYLSLYALIESMWEQANNSHLIFEDSLF
LSSIKLTLAYNESLVTGKLSSPIGSIVQCAFIQSVRKHIDEILTCSKSLSENFFNYLETG
KWPDYQSDRGKSDAMFLSWYLLWHGIPSSHLVKSAVKNIKSKAPMSLSMVPLLQLLFPST
QTKGIFEINKFHYSS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcggggtccgcgagttgtctgtcctgggcgagttcaagccgttcggtctttcg
gtcgaggatctcgacggcaagacactcgacgacgcttcctcggagcaccagtacttcctc
ttccacccggaagttgcgcgtgaggggcacgggaccgccagcaacctcgacttctcctcc
ccttgtacaccttccgaaggagatcatgagattttcatacgcggcaatcagataatatgg
agcagtgggccccgggttcataaaagatacacctccaccaaagcagtcattatggtctgt
tggtgtcacatggagggtatttcagatgcactcctctgtgttttacagagtgatgtgtta
tctatttatggcgtgtctgtaggtgaacatctgaaactctacaagtggaagctgaagaag
caatataattcggaacgatctgagcagcgcgaggaggtcgaccatgtagaccccaacact
tatcaatcgtgtggctcgggcggtggcaatgatcacaccaaggacgacctttgccatcct
tccgaggcggagccattgattagtttggaaagaactgtgaagaacgtcgaaggagaagat
gaagaggcagtcgccccttctatggtgaaaactctctgcttctgcagccacgtcggcaga
aagtccacagtagagaagagcttgctggagatgaagttgaaacgaccaactggaattgag
aagaagatgctcactgctctgccagcctcctcctctgttgaacaccttgcgttagcaacc
acgtcggcaaagaaatcttcggatgtagagacggagaggaagcaagaacaaccagagaag
agggaagaacagccggattcctctgttagaaaccatgtccacgggaagccttcagagagc
agaaccactgcgggaacactgaggagtcagaagaaccctaagatgaggtcgtcaccttcc
ccagagccgtcggagatgtcgtcgtcgtcggagaacagaggagcccgaggcgggatagcc
tcgttggccatcagggatgggagtcagcctgcggatcgcgcgcttgctggtcacgtcgag
gacgatcgtgcgatcgttggcgaatacgaagaggaacatgatattactacagtcggaatg
ctgctaggtatggcagcatcttatcgtggaacaatgcatcttgaagtatcaaagatgcta
tacctccatgttccctctcgacaccagttgtcttttcctgagttggaactgccaacaagt
ttgcagtctgctgctttggtggccattggccttctctacgaaggttcagcacacccattc
accatgaagattcttttgggtgagattggtcgaagaagtgctggtgacaatgtgcttgaa
agagaaggatatgctgttgctgctggatatgctctgggacttgtagctttaggtcgagga
aatgatgcccttggctttgtagaccgatttgtggatcgaattttccagtatattggcgag
aaaggagttaaaaatgagaaattttcagtagttgcacaaccagcagaagatcatgtccgt
attcttgggcagatagtggatggagcccatgtaaatgttgatgtgacagctcctggtggt
acaattgcactcgctctgatatttatgaagacagaatcagaagaaattgtgtctagactc
cgtctgcccattagccactatgatctgcagtatgttaggcctgacttcatcatgcttcgt
gtcattgcacgtaatttgattatgtggagcaacatgcaaccatctattatttggattgaa
tctcaaattcctgattttatccgattagcggtcctgaaattagatggagctagtagtgat
gatgatgagttcgatgcagaagctgttgtccaggcatatgtgaacattgtatccggtgct
tgcatttcacttggattgaagtatgctggcaccaaaagtgaagaggctcgggagctgctt
tataattatgctctatactttcttaatgagtttaagcacattccagcaatggctaatgtc
ttaccaaagggattgctgcattatgtggatcgcgggacatcagaaatatgtttgcatctg
attattctttctctctctctggttatggcaggatcagggcatttgcaaacatttcgatta
ttgagatacttgcgtggtcgaggttctacagaaggacaaataaattatggaacacaaatg
gctgttagcttagccattggttttttattccttggtggtggcatgcaaaccttttcaact
ggaaacagtgctgttgctgcactgttgattactctttatcctcgttttcctacaggtccg
aatgacaatcgttgccaccttcaggccctacggcatttgtatgtaattgctgctgaatct
cgtcggctgcagacagtggatgttgatacaggtcttccggtatattgtccaattgaaatt
acaatcaaagagacagaacattatgctgagtccagctattgcgaagttactccttgcatt
cttccagaacgttgtgtgctgaagactgttcacatttgtgggcctagatattggcctcaa
gtcatacaagttatacctgaagaaaaaccttggtggagatttgaggataagagtgaccct
tttaatggtggtatcttatatgttaagagaaaagttggctcctgttcctacgaggatgac
cccattggttgtcagtctttgctttcaagagcaatgcataaggtttttgatatgacggat
ttggactatgcaaacatgagaaacagcaataaccctgtacctgattcatacaaaatggat
caattggttagcacattttctggtgatccaagcttgattgcttttgctcaactttgctgt
gactcctggaggagcaggtcagatcccaatttccaggagttttgctcacaattaatattt
gaatgtgtgagcaaagacaggccagctcttcttcagatctatctctcattatatgctttg
attgagtcaatgtgggagcaggctaacaacagccatcttattttcgaagattcacttttc
ctttctagtataaagcttactttagcttacaatgaatctcttgtcactggcaaactgtct
tctccaattggatctattgttcaatgtgcattcattcagtcagttcggaagcacatagat
gaaattttgacctgttcaaaaagtcttagtgagaacttcttcaattatttggagacagga
aagtggcctgattatcaaagtgataggggtaaatcagatgcaatgtttctttcttggtac
ctgctctggcatgggataccatcatctcatcttgtgaagtcagctgttaaaaatatcaaa
tcgaaggctccaatgtccttatctatggttcctctcttgcaattattgtttccatcaact
caaacaaaaggaatttttgaaatcaacaagtttcattactcgtcatag
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