Zingiber officinale (ginger): 121996167
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Entry
121996167 CDS
T08725
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121996167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
121996167
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121996167
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
121996167
NCBI-ProteinID:
XP_042405951
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Position
6A:25961660..25969570
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AA seq
780 aa
AA seq
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MAEDLAGGAVVSTDPDGPDGVRMTWNAWPRSKVESSKCVVPVAASIAPIRSSPSLVVLPY
HPLRCKPPCAAVLNPFARVDYGAKIWICPFCFSRNHFPPHYAGISEHNYPAELYPQCTTI
EYAPPPLDAAAPPPPPVFLFVIDTCLIEEELGYVKSAMRRAIGLLPDHALVGLITFGTQV
HLHELGFADITKIYVFRGTKEITKEQILDQLGLSSAGVRHGGVAGAPGYPRGPQANALHP
STSVNRFLLPASDCDYTLNALLDELQLDRWPVETSSRALRCTGVALTVAAGLLGACVAGT
GARIIALVGGPCTVGPGMIVSKDLSEPVRSHKDLDKDAAPHFHKAVKFYDNLAKQLVNQG
HVLDLFASALDQVGVAEMKVAVERTGGLVVLAESFGHPVFKDSFKRIFEDGEQSLGLSFN
GTLEINCSKDIKIQGIIGPCTSLDKKGALCADTIVGQGNAISWKMCGLDRTTCLTVFFDI
SPSERSGQQGIPNPQLYIQFLTNYQNPEGQMRLRVATIMRKWVDGSNTEELVEGFDQETA
AVVLARYVSLKMEMEEEFDATRWLDRSLIRLCSRFGDYRKDDSASFTLHPNFSILPQFMF
NLRRSQFVQVFNNSPDETAYFRMLLNRESITNSVVMIQPSLLSYSFNSPPTPALLDVSSI
ALDRILLLDAYFSIVIFHGTTIAQWRNLGYQNQPEHQAFAQLLQAPQDDAHMIIKERFPV
PRLVICDQHGSQARFLLAKLNPSATYNSAHEVVPGSDIIFTDDVSLQVFCEHLQRLAVQS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagacctcgctggaggcgccgttgtctcaaccgatcccgacggccccgacggc
gtccgcatgacctggaacgcgtggccccgctccaaggtggagtcgagcaagtgcgtcgtc
cctgtagccgcctcaatagccccgatccgctcctccccctccctcgtcgtgctaccttac
catcccctccgctgcaagccgccctgcgccgccgttctcaacccctttgcgcgggtcgat
tacggagctaagatctggatctgccccttctgcttctctcggaatcatttccctccgcac
tacgccggcatcagcgagcacaactacccagcagagctgtacccacagtgcaccaccatc
gagtacgcgccgccgccgctcgatgctgccgctccaccgccgcctcctgtcttcctcttc
gttattgacacctgcctcatcgaggaggaacttggttatgtcaaatcggccatgcgtcgc
gccattggcctcctgccggaccatgccctcgttggtctgatcaccttcggcacccaggtc
catctccacgaactgggatttgctgatataacgaagatctacgtgttccgtggtacgaag
gagatcacgaaagagcagatcttggatcaattggggctttcctctgctggtgttcgccac
ggtggtgttgctggggcgccaggttatcccaggggaccccaggctaatgcgttgcatcct
tctacatccgtcaataggttcctgcttcccgcgtctgattgcgactacacactcaatgct
ttgctagatgagctccagttagatcgctggccggtggaaacaagtagtcgggctttgcgt
tgcactggagttgcccttactgtcgcagctggcttactaggagcatgtgttgcaggaact
ggcgcccggatcatagctctagttgggggaccgtgtacagtgggccctggaatgattgtg
tcaaaagacctatctgagcctgtgcgctcgcataaagaccttgataaagatgctgctcca
cactttcacaaagctgttaaattttatgataatcttgcaaaacaactggttaaccagggc
catgtcctagacctttttgcttcggcacttgatcaggttggggttgcagagatgaaagta
gcagttgaaaggacaggtggactggttgttcttgctgaaagttttggacatccagttttt
aaagattcctttaaaagaatttttgaggatggcgagcagtctcttgggctttcttttaat
ggcactcttgagatcaattgttcaaaggacatcaaaattcagggaattattggaccatgt
acatccttggacaagaagggagctctttgtgcagacactattgtaggacaagggaatgcc
atttcatggaagatgtgtgggcttgataggactacttgtcttacagttttctttgatatt
tcacctagtgagcgatcaggtcaacaagggattccaaatccacagttgtatatacaattc
ctcaccaactatcagaaccctgaaggtcaaatgaggttacgtgttgcaacaattatgagg
aaatgggttgatggttccaatactgaggaactagttgaaggttttgaccaggaaactgca
gctgttgtattagcaagatatgtatccttaaaaatggagatggaggaagaatttgatgca
actagatggttggatagatcacttattcgtctttgctcacgatttggtgattatcgaaag
gatgattctgcttcatttacactacatccaaatttctcaatactgccacagttcatgttc
aatttaaggcgctcacaattcgttcaggtttttaacaatagtccggatgagactgcctat
ttccgtatgttgttgaatcgtgagagtattaccaactcggtcgtcatgatccagccttca
ctgctttcttactctttcaattctccccctacacctgcattgttggatgtgtcatccata
gctttagatcgtatactgttgcttgatgcgtatttcagcatcgtcatttttcatggcact
accattgctcaatggcgcaatttggggtatcaaaatcaaccagagcaccaggcctttgcc
cagctattacaagctcctcaggatgatgctcacatgatcataaaagaacggttccctgtt
cccagattagtcatttgtgatcaacatggttctcaggcaagatttttgttagcaaagttg
aacccatcagccacgtacaattctgcccacgaggttgttccaggcagcgacatcatattc
accgatgatgtcagccttcaagttttctgcgagcacctacagagattggctgttcagtca
tga
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