Zingiber officinale (ginger): 122006191
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Entry
122006191 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122006191
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122006191
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122006191
03036 Chromosome and associated proteins [BR:
zof03036
]
122006191
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122006191
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122006191
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122006191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ComGF
Motif
Other DBs
NCBI-GeneID:
122006191
NCBI-ProteinID:
XP_042417532
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Position
7B:86544999..86576471
Genome browser
AA seq
516 aa
AA seq
DB search
MSGDSDEDEGRAVASSTISPPLDWKFSQVFGERMVGEEVQEVDIISAIEFDKSGDHLATG
DRGGRVVLFERTDARTHGSRKDLERQDYQFSRHAEFRYKTEFQSHEPEFDYLKSLEIEEK
INKVRWCQAANGALFLLSTNDKTIKYWKVQEKKVKQVSEMNLDASMIVGNGCNGTSTTSG
PRLGLSNGCARSNFNYLSNDLSFPPGGFPSLRLPVVVTSQEKSLVARCGRIYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISTQSFNIVDVKPTNMEDLTEVITSAEFHPIQCN
MLAYSSSKGSIRLIDLRQSALCDSHSKLFENHEAPASRSFFTEIIASISDVKFAKDGRHI
LSRDYMTLKLWDINMDSTPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGFRVATG
SYSNLFRVFGCVPGSDEATILEASKNPMRKQVQNPTRTSRSLGSFTRGMRRGAENPNVDA
NGNTFDSTTKSLHLAWHPTENLIACAAANSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggacagtgacgaggatgaagggcgggcggtggcgtcgtctaccatttcgccg
ccactggattggaagttctcgcaggtattcggggagcgcatggtcggagaggaagtccag
gaagttgatatcatctcagcaatagaatttgataaatctggagatcatcttgcaactgga
gatagaggaggtcgcgttgttttatttgagaggacagatgctagaactcatggctctcgg
aaagatctggagaggcaagattatcaatttagcaggcatgctgagtttcggtacaaaacg
gaatttcagagccatgaaccagagtttgactatcttaaaagtttggaaatagaggagaag
atcaataaggttagatggtgtcaagcagctaatggtgctctattccttctctcaactaat
gataaaacaataaaatactggaaggtacaagaaaagaaggtgaaacaagtttctgagatg
aatttagatgcttccatgattgtgggaaatggttgcaatggtacctcaaccacaagtggt
cctagattgggtctttctaatggatgtgctagaagcaattttaactatttgagcaatgat
ttgtccttccctccaggaggatttccatcactacgtttaccagtggtagtaactagccaa
gagaagagccttgttgctagatgtggaaggatatacgctcatgctcatgattaccacata
aactccatttcaaataacagtgatggtgagacatttatatcagcggatgatcttcgaatc
aatttatggaatttggaaattagcacccagagctttaatattgttgatgtgaaaccaaca
aatatggaagatttgactgaggttataacttctgctgaatttcatccgatccagtgtaac
atgctggcgtatagtagctcaaagggatcaattcgtcttatagacttgcgtcaatcggcc
ctatgtgatagtcattctaagttgtttgagaatcatgaggcacctgcttcaaggtctttt
ttcactgagattattgcctcaatttcagatgtcaaatttgccaaggatggaagacatatc
ttatctcgggattacatgactcttaagctttgggatataaatatggattcaactccagtt
gctacctttcaggttcatgagtacttgaggccaaagttatgtgatttgtatgagaatgac
tcaatttttgacaaatttgagtgttgtcttagtggagatgggtttcgtgtggcaactggt
tcttacagtaatctttttcgtgtatttggctgtgttcctggaagtgatgaagctacaatt
ttggaagccagtaaaaatccaatgaggaaacaagtgcaaaaccctacaagaacttccaga
tctcttggtagcttcacacgtggcatgagacgaggagcagaaaacccaaatgttgatgcc
aatggaaacacatttgactccacaaccaaatcacttcatttagcttggcacccaacggaa
aacttgatagcttgtgctgctgcaaacagcttgtacatgtactatgcctga
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