Zingiber officinale (ginger): 122012003
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Entry
122012003 CDS
T08725
Name
(RefSeq) transcription factor RAX2-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122012003
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122012003
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_2
Motif
Other DBs
NCBI-GeneID:
122012003
NCBI-ProteinID:
XP_042424381
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Position
8A:complement(4072359..4073487)
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AA seq
265 aa
AA seq
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MGRAPCCDKANVKRGPWSPEEDAALKSYIEKNGAGGNWIALPQKAGLKRCGKSCRLRWLN
YLRPDIKHGGFTEEEDNVICTLYDRLGSRWSVIASQLVGRTDNDVKNYWNTKLKKKLLVP
RATSNSTLHGAPSTPPPPVLYPPIKTEAFGGADFSFAHVKPLQPSYGLLSQQYRQMPFPE
RIFIEQVVSPSEEASAASSSSVNSWCSYSNELFLSSLGLGDAAALFLGGYSFGCQESDPT
PSDMATPPQGFTCHDGCNCSKFNYP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggggagagctccgtgctgcgacaaagccaacgtgaagcgggggccctggtcgccggag
gaagacgccgctctcaagagctacattgagaaaaacggcgccggcggcaactggatcgct
ttgcctcagaaagcaggcctcaagcgatgcggcaagagctgccgattaagatggctcaat
tacctccgccccgacatcaaacacggcgggttcacagaggaagaggacaacgtcatttgc
actctgtatgatagactcggaagcaggtggtctgtgatcgcttcccagctggttgggaga
actgacaacgacgtgaagaactactggaacaccaaactcaagaagaagttgctcgtgccg
agggcaacctccaactccactctccacggcgcaccgtccactccacctcctccggtcctc
tatccacccatcaaaaccgaggctttcggcggcgccgatttcagcttcgcgcatgtcaag
cctcttcaacccagctacgggctgctctcccagcagtatcggcagatgccattccctgag
aggattttcatcgaacaagtggtctccccgtcggaggaagcctcggcggcttcgtcgtcg
tcggttaacagctggtgcagctactctaatgagctgttcctgtcgtcgcttgggctggga
gatgcagctgccttattcctcggtggctacagcttcggctgccaggaaagcgatccaact
ccaagcgacatggcaacaccgccccagggtttcacttgtcatgatggatgcaactgcagc
aagttcaattacccatga
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