Zingiber officinale (ginger): 122012333
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Entry
122012333 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122012333
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122012333
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122012333
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122012333
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122012333
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122012333
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122012333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
zf-UBP
UBA
UCH_1
UBA_4
CUE
Motif
Other DBs
NCBI-GeneID:
122012333
NCBI-ProteinID:
XP_042424766
LinkDB
All DBs
Position
8A:9691067..9710474
Genome browser
AA seq
793 aa
AA seq
DB search
MELLRSHLSRVRIPEPTNRIYKNECCVSFDTPSSEGGLYVDMSSFLAFGKEYVGWNYEKT
GNPIYLHIQQRPKPVPEDRPLKKPTLLAIGVEGGFDYQEIEYEETHHIVILPEYVSLPFP
SVELPEKIRLAVDAVLLADGAERKEQLAAWTAEKKKASAYALSLQQINNGIVVPPSCWKC
CKCNKTDNLWLNLTDGMILCGRRNWDGSGGNNHAIEHYKETNYPLAVKLGTITADLESAD
VYSYPEDDTVEDPLLAQHLAFFGIDFSSLQKTEMTTAERELDQNTNFDWNRIQESGQEVE
LLFGPGYTGLLNLGNSCYMASTIQVVFTTHAFISRYYENQSLKMAFAMAPSDPTLDLNMQ
LTKLAHGLLSGKYSLPVQQKQEGIPPRMFKTVIAASHPEFSSMRQQDALEFFLHLLDQVE
RANTEKPALDPSKSFKFVIEERLQCPSGKVAYNKRSDYILSLNIPLHEATNKEQLEGFNK
TKAEKNAEGADITSGEIVRPRVPLESCLASFSSTEEIHDFYSSALDAKTTANKTAGLATF
PDYLVLHMRKFVMEEGWVPKKLDVYIDVPDVIDITHMRSNGLQPGEELLPETGVIGEVEA
TQLVASEDIVSKLAAMGFNYLHCQKAALNTANVGVEEAMTWLLSHMDDPDIDEPILYNSH
AMEVHSIDETSVETLISFGFHEEVARKALKASGGDIEKATDWIFSHPEVSSSKDTDATSN
AVEAGDPGVSDGSGRYKLMAFISHMGTSTHCGHYVAHVYKDGRWIIFNDSKVGASVDPPK
EMGYLYFYERITD
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagctactccgctcccacctctccagggtccgtatcccggagcccaccaaccgcatc
tacaagaatgaatgctgcgtctccttcgatactccgagttcagaaggaggtctctacgtt
gatatgagttcgtttcttgcatttgggaaggagtacgttggctggaattacgaaaagaca
ggaaacccaatttaccttcacatacagcagagaccaaagcctgtgcctgaggaccggcct
ttaaagaaaccaactctgctcgcaattggtgtggagggaggatttgattatcaggaaatt
gagtatgaagaaactcaccacattgtaatattgcctgaatatgtatctctaccatttcct
tctgttgagttgccagaaaaaattaggctagcggtcgatgcagttttgttagctgacggt
gctgaacgcaaagaacagttagctgcttggactgcagagaagaagaaagctagtgcttat
gcattatctctgcaacagattaataatggcattgttgtgccaccgtcttgttggaaatgt
tgcaaatgcaataagactgataatctgtggctgaacttaactgatggaatgatactttgt
ggccggagaaattgggatggaagtggtggcaataatcatgctatcgaacactacaaggag
acaaattatcctctagctgtgaaacttggtacaataactgcagacttagaaagtgcagac
gtttactcataccctgaggatgataccgtcgaggatcccctattagctcaacatttggct
tttttcggtattgacttctcatcattgcaaaagactgagatgactactgctgaaagggaa
cttgaccaaaacaccaattttgactggaatcgtatccaggaaagtgggcaggaagtggag
ctcttatttggaccaggttatactggtcttcttaaccttggaaatagttgctatatggca
tcaacaattcaagtggtgtttacaactcatgctttcatctctagatactatgaaaaccaa
agtctgaagatggcttttgcaatggcaccttctgatccaacattggacttgaatatgcag
ctgactaaactggcacatgggttgctttctggcaaatattccttgccagttcaacagaag
caagaaggtatccctcctcgcatgtttaaaacagttattgctgctagtcatcctgagttt
tcgagtatgaggcagcaggatgcacttgagttttttctgcatttgcttgaccaagttgaa
cgggccaatactgaaaaacctgcactggatccttcgaagagtttcaagtttgtgattgaa
gagagacttcagtgcccctctggaaaagttgcttataataaaagatcagattatattctt
tctttaaatataccactacatgaggcaactaacaaagaacagcttgaaggctttaacaag
accaaagcagaaaagaatgcagaaggggctgatataactagtggtgaaattgtacgacca
agggtccctttggaatcgtgcctagctagtttttcatccactgaggaaattcatgacttt
tacagttcagcattagatgctaagacaacagcaaacaagactgctggtttggctactttt
cctgattatctggttttgcacatgaggaagtttgtgatggaagaaggctgggtgccaaag
aaactagatgtttatattgatgtacctgatgtaattgacatcacacacatgcgcagcaat
ggtttacagccaggagaagaattactgccagaaacaggtgtcattggggaggttgaagct
acccaactagttgctagtgaggacattgtttccaaacttgcggctatgggtttcaattat
ctccattgtcaaaaggctgccctaaacactgctaatgttggagttgaggaagcaatgaca
tggctgctatctcacatggatgatccggatatagatgagcctattttgtataactctcat
gctatggaagttcactctattgatgaaacaagtgttgaaactttaatttcatttgggttc
cacgaagaggtggctagaaaagcattaaaagcatctggaggggacatagagaaagcaact
gattggatttttagccacccagaggtctctagctcaaaggatacagatgcaacctcaaac
gctgtggaggctggtgatcctggggtatcagatggaagtggaagatacaagctcatggca
tttattagtcatatggggacttccacccactgtggccattatgtggctcatgtctataaa
gatggaagatggataatattcaatgacagtaaagttggagcatccgtggatccacctaaa
gaaatggggtacctgtacttctacgagagaataactgactga
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