Zingiber officinale (ginger): 122014892
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Entry
122014892 CDS
T08725
Name
(RefSeq) transcription factor MYB3R-5-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122014892
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122014892
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
122014892
NCBI-ProteinID:
XP_042427329
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Position
8B:complement(23238413..23265739)
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AA seq
616 aa
AA seq
DB search
MKVEQSCVENRQLAGASSSSLSDGSYGLSRVSTAISSPLKSSSSRRRTSGPIRRAKGGWT
LQEDETLRKAVEAYKGRCWKKIAEFFPDRTEVQCLHRWQKVLNPELIKGPWTLEEDEKIT
SLVAKYGPTKWSMIAKSLPGRIGKQCRERWHNHLNPVIKKDAWTEEEELVLMNAHHEYGN
KWAEIAKVLPGRTDNSIKNHWHSSLKKKLDFFLATGKLPPVPVDGSKDMRSLDSRQSLHC
SSDGSDINARAFSESASSMDIDLPARQGLDDQKHRLESSTVESKMEAINNLIVRRIHDPI
VEFSTHIESSTIEPKKEAVNNLIVRIIHDPAVESSTHTLTPDICTRSDPGTELAECRNTI
DKDQNVESKLEALANPNVRGIHSPSVHCIKDMPTFDVSTRSPENEVTDCRNTDEDSRLNC
ESEPMHQETPLGSLYYKPPQVEDICLSENYRVITTSTNMQQSCGSCVVISPEGYLTPSSV
TAKGPIQDVHSILKNAARSFPSTPSIFCRGKKMAETTLDSDASTSGVKSAKLMDNCASTG
EGKNIHNLETIDNSKLRSNPCDKGDLSYNRKNFDVSPPYRFRFKRTATIKSVEKQLDFSE
NDSNGKTNPLILDVDT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggaacagagttgtgtggagaacaggcaattggcaggagcctcgagctcgtcc
ctctctgatggaagttacggtctgtcgagggtttcgacagctatttctagcccactgaag
tcttcttcgtcacggaggaggactagtggtcctataaggcgagcaaagggtggctggaca
ttacaagaggatgagacgctgaggaaagctgttgaagcttacaaaggaagatgttggaag
aaaatagctgaattttttcctgatagaactgaggtccaatgccttcatcggtggcaaaag
gttctcaatcccgaactcattaaaggtccatggaccctagaggaagatgagaaaatcacc
agtcttgtagcgaaatatggacctacaaaatggtccatgattgcaaaatctcttcctggt
cgtattggtaaacagtgtcgagagaggtggcataatcatctaaatcctgtgataaaaaaa
gatgcttggactgaagaggaggagcttgttctcatgaatgcccatcatgaatatggaaat
aaatgggcagaaattgccaaagtcttacctggaaggactgataactcaataaagaatcac
tggcatagttcgttaaagaaaaagttagatttctttttggctactggcaagcttccacct
gttcctgtggatggttcaaaggatatgagaagccttgacagtagacaatcacttcattgt
tcaagtgatgggtcggacataaatgccagagcgttttctgaatcagccagttccatggac
attgatctccctgctagacaagggttggatgaccaaaaacacaggttagaatcatcaaca
gttgagtctaagatggaagctataaacaacttgattgtgagaagaattcatgatcccatt
gttgagttcagcactcatatagaatcatcaacaattgagcctaagaaggaagctgttaac
aacttaattgtgagaataattcatgatcctgctgtagagtccagcactcatactctcaca
cctgatatctgcactagatctgatcctgggacagagttggcagaatgtcgtaacaccatt
gacaaggatcaaaatgttgaatcaaagttggaagctttagctaatccaaatgtaagagga
attcacagtccctctgtacattgcattaaagatatgccaacctttgatgtctcaactaga
tctccagaaaatgaagtcacagattgtagaaacactgatgaggatagtcgactgaattgt
gaatctgagccgatgcaccaggaaactcctcttggttctctctattataagccacctcag
gtagaagatatttgtctttctgaaaattatagagtcataaccacatctacaaatatgcag
caatcatgtgggtcatgcgttgtgatatcacctgaaggttacctcactccttcctcagta
acggcaaaaggtcctattcaagatgttcattccatcttaaaaaacgcagctagaagtttc
ccaagcactccgtccatattctgcagaggaaaaaagatggcagaaacaactcttgattct
gatgctagtacttcaggggtaaagtctgcaaaacttatggacaattgtgcttctactgga
gaaggaaaaaatatacataatttggagacaattgacaattccaagttaagatcaaatcct
tgtgacaaaggagacttatcatacaacaggaagaactttgatgtttctcccccatacagg
tttagattcaaaagaactgcaactatcaaatctgtggagaagcagcttgatttttcagaa
aatgattctaatgggaaaacaaacccccttatattggacgtggacacttaa
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