Zingiber officinale (ginger): 122016026
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Entry
122016026 CDS
T08725
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 10-like
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122016026
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122016026
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
Helicases
122016026
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
122016026
NCBI-ProteinID:
XP_042429092
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All DBs
Position
8B:complement(37344944..37362366)
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AA seq
435 aa
AA seq
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MEEDGSPQTFKTLGLKEELVEACEILGWKAPTKIQIEAIPFALEGKDIIGLAQTGSGKTG
AFALPILQALLDTPQRLFACVLSPTRELAIQISEQFEALGSGIGVKCTVLVGGVDMTQQA
ISLGKRPHIVVGTPGRLLDHLTNTKGFSLRTIKYLVLDEADRLLNLEFEKAIDDILKVIP
SERNTFLFSATMTKKVSKLQRACLRHPVKIEADTKYSTVDTLNQQYCFIPAKHKDCYLVY
ILNEKQNCTTMVFTRTCESTRLLSLLLRNIGMRAIPISGQMSQDKRLGALNRFKAGDCNI
LICTDVASRGLDIPSVDMVINYNIPTNSKDYVHRVGRTARAGRSGMAISLVNQYEVAWYM
QIEQLIGKKLPKYPAEEAEVLVFFERTSDAKRIALAKIKESNGNKKRKKGGDDDDDEAEE
FAVNTKKAFKKSKRR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgggtctccgcagaccttcaaaactcttggtttgaaggaagagttggtg
gaagcttgtgagattttggggtggaaagcccctacaaagatccaaattgaggcaattccc
tttgctcttgaaggcaaagatattattggattggcacaaacagggtctggcaagacagga
gcttttgcattgccaattcttcaagctttattggacactccacaaagattgtttgcttgt
gtactttcccctactagggaattggcaattcagatttctgaacaatttgaagctttagga
tctggcattggagtaaaatgcactgtgttagtgggaggtgttgacatgacacaacaagca
atttctcttggaaagcgcccacatattgtggtgggcacaccggggcgtctcttggatcat
ttaaccaatacaaaaggttttagccttcgcacaataaagtatttggtccttgatgaggct
gataggttactcaacttggaatttgagaaagctattgatgatatcttgaaggttattcct
tctgaaaggaatacatttttattttcagctacaatgaccaaaaaggtcagtaaacttcaa
cgagcttgtttaaggcatcctgtgaagatagaagctgatactaaatattccacggtggat
acccttaatcaacagtattgctttattcctgcaaagcataaggattgttatcttgtctac
attcttaatgagaagcagaattgtacaacaatggtattcactcgaacctgtgaatcaacc
cggcttctgtccctacttcttcgaaatatagggatgcgagcaattcctattagtggtcaa
atgagccaggacaagaggttgggggctctaaacagattcaaagcgggtgactgtaacatc
ctgatatgcacagatgtggctagcaggggcctggatattccttcagttgatatggttatc
aattataatataccaacaaattctaaggactatgttcatcgtgtgggcagaactgcacgt
gctgggcgttctggaatggccatatcattagtaaaccagtatgaagtggcatggtatatg
cagatagagcagcttattggcaaaaagctaccaaagtacccagctgaggaagctgaagtt
cttgtgttctttgaacgtacttcagatgccaagaggattgctcttgcgaaaattaaggaa
agtaatggcaataagaagagaaagaaaggaggagatgatgatgatgatgaagccgaggaa
tttgctgtcaataccaagaaagcattcaagaaatcaaagagacgatga
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