Zingiber officinale (ginger): 122021308
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Entry
122021308 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122021308
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122021308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122021308
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122021308
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122021308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122021308
NCBI-ProteinID:
XP_042435347
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All DBs
Position
9A:complement(13185468..13189864)
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AA seq
436 aa
AA seq
DB search
MGCPRNPRSVRVSCYCGSCGLKSVGDLGKFRWTVLRFVKRLDFRMSGAPHVRSFNVADSE
ARPVLVPGGNKARSLTPSRKPASKPLNKTDSTETTAIDEPKKAPSPAEDTAHSGSCFSAP
SVLRRHEMLLQSNLSLNASCSSDASTDSFCSQASTGRVSRVNSTSKRRQSSARIGKVATK
LNNNFSDDASIPSVELVQGKRKCAWVTSNTDPCYASFHDEEWGVPVHDDKKLFELLVLSG
ALAELTWPVILTKRQIFREVFLNFDPAAVAKLNEKKFIVPGNIASSLLSEPKLRATIENA
RQIHKIINEFGSFDRYCWSFVNYKPIVNKFRYQRHVPVKTSKADVISKDLVRRGLRSVSP
TVIYSFMQAAGLTNDHVVSCFRFEECIAAALSSIDKTQEGTIKISSKVEEKTSDSVAMMG
EIDLELSIGMDELSIC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggatgccctcgaaaccctaggtcggttcgggtttcgtgttactgtgggagttgtgga
ttgaaaagtgttggagatttgggtaaatttcggtggacggtgctgagatttgtgaaaagg
ttggattttaggatgtcaggagctcctcatgttcgttctttcaatgtagctgactctgaa
gcaaggccggtccttgtgcctggcggtaacaaggctaggtcattgacaccttctaggaaa
ccagcttcgaagcctttgaataaaactgacagcaccgaaactacagcaattgatgagccg
aagaaggctcccagtcccgcagaagatacggcacattctgggtcttgtttcagtgctccg
tctgttctgaggaggcacgagatgctgttgcagtcaaatctgtcactgaatgcttcctgt
tcctctgatgcatccacagattcgttttgcagccaagcctccacaggaagggttagtagg
gtgaactcgacaagtaagaggaggcagagctctgcgaggataggcaaagttgcaaccaag
ttgaacaacaatttctcagatgatgccagcattccctcggttgaacttgtgcaaggaaag
agaaaatgcgcttgggtcacatctaatacagacccatgttatgcttctttccatgatgaa
gagtggggtgttccagtccatgatgataagaaattatttgaacttcttgttctatctggt
gcattagctgagcttacatggcctgttatcctcaccaaaaggcagatatttagggaagtt
tttctgaactttgatcctgctgcagtcgccaaattgaatgagaagaaatttatagtgcct
ggaaatattgctagctcacttttgtcggagcccaagctgagagctaccattgagaatgct
cgccagatacacaagataataaatgagtttggatcattcgatagatactgttggagcttt
gtgaactacaaacccatcgtcaacaaatttcgctaccagcgacacgttcctgtcaagact
tctaaagcagatgtgatcagcaaagatctggttagaaggggcttgcgaagtgtgagccca
acagtcatatactccttcatgcaggctgcgggtttgacaaacgaccatgtcgtcagctgt
ttccgcttcgaagaatgcatagcagctgcgttgtcgagcattgataaaactcaggagggt
acaataaagataagcagcaaggtggaagagaagactagtgacagtgtggcaatgatggga
gaaatagatttagagttatcgataggtatggatgaactgagcatttgttag
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