Zingiber officinale (ginger): 122024633
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Entry
122024633 CDS
T08725
Name
(RefSeq) DNA-3-methyladenine glycosylase 1-like
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122024633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122024633
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122024633
DNA repair and recombination proteins [BR:
zof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122024633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122024633
NCBI-ProteinID:
XP_042439223
LinkDB
All DBs
Position
9B:complement(11526072..11527487)
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AA seq
317 aa
AA seq
DB search
MGRHVVERIPSAREVERRSSQAKSALSRHLQRVYPLSIKKSCSLLSLSSLSLSQNSNASS
LNSSFSSWDPKNSVSLRKLFGSWEGTETGFGVDDLRSLRGGEDPASGILSDELGSGKRCN
WITEFSDEAYISFHDEYWGVPIYNDNRLFELLALCGMLIDHNWTEILRRREIYRKVFLEF
DHHLVAKMEEKDIMDITFDKELMLAECRVRCIVDNAKCIQKVSEEFGSFCKYVWSQVNHK
PMVNKYKCSRSVPLRTPKSEAMSKDLVRRGFRLVGPVIVYSFMQAAGLANDHLVHCFRFD
ECVRFGERGGIPLPYKD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcatgtggtagagaggattcctagcgctcgcgaagtcgaaaggcgatcatcg
caagcgaagagcgcgctatcgcgccacttacaaagagtttaccctctcagcatcaagaaa
agctgctcattgctcagtctctcatccctctctctatctcagaattcaaatgcatcgtcc
ctcaatagctccttctcgagttgggaccccaagaattcagtgtcgttgcgaaagcttttc
gggtcctgggagggcaccgagacagggttcggagtcgatgacttgaggtctcttcgtggc
ggcgaagatccagctagtggaattctgagtgatgagttaggaagcgggaagaggtgcaat
tggattacggaatttagcgatgaagcgtatatttcattccacgatgagtattggggggta
cccatttacaatgacaatcgactctttgagcttcttgcattgtgtggaatgctgattgat
cacaattggactgagatattgaggagaagagagatatacaggaaagtgtttttggaattt
gatcatcatttagttgcgaagatggaagagaaagacatcatggacataaccttcgacaag
gagctcatgcttgcggagtgtagagtgcgatgcatagtggataatgccaagtgcattcaa
aaggtgagtgaagaatttggatccttttgtaagtacgtttggagccaagtgaaccacaaa
ccgatggtgaataaatacaagtgctctcggagtgtgccattgaggacgccgaaatctgag
gcgatgagcaaagatctagttcggagagggtttcgattggtgggtcccgtcatcgtctac
tccttcatgcaagccgccggattagccaacgatcatcttgttcattgcttccgattcgac
gagtgtgtacggtttggagagaggggaggcattccgttaccctacaaggattaa
DBGET
integrated database retrieval system
