KEGG   Zingiber officinale (ginger): 122038537
Entry
122038537         CDS       T08725                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122038537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122038537
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     122038537
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 122038537
NCBI-ProteinID: XP_042454267
LinkDB
Position
1A:179793174..179813202
AA seq 477 aa
MGEYCNQGGSVPQLRLPSLYLDGEAAGDRRFLKHVFDNVHGNITLDPLSLKFIDTEQFQR
LRDLKQLGLTYLVYPGAVHTRFEHSLGVYWLAGESLRFLQTYHGAEIDIDSYDIQIVKLA
GLLHDIGHGPFSHLFEHEFLPQVLPGSEWSHEQMSIELVDYMVDEHHIEIDSDHLRKVKE
MIVASSKFAVPRSSKEKQFLYDIVANGRNGIDVDKFDYIARDCRACGLGCNFQFQRLFEG
MRVMGDEICYPAKEYLSIHKLFSARADLHRTVYTHSKVKSIELMAVDALVKANGYLKISS
YPFDPAEYWKLDDTILKTIEFADSKKLKESKEIIQRIRRRDLYQFCNEYAVPKEKLEHFK
NITPQDIICSQKANGINLKAEDIVVSNVKIDLTRGKHNPLESISFFKDYYSEEKFNITDD
RISHLLPACCQDRIVRVYAKKPELVEAVSEAFENLQLKMYGVKTQVHETPEKKRRRA
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgggtgagtactgtaaccaagggggttcggtgccgcagctgcggctgccgtctctgtat
cttgacggcgaggcggccggcgaccgtagattcttgaaacatgtcttcgataacgtccac
gggaacatcactctcgatccgttgagcttgaagtttattgacaccgaacagtttcagagg
ctacgagatcttaagcagctaggtctcacatacttggtgtatcctggtgccgtgcacaca
cgatttgagcattccttgggtgtttattggcttgctggggagtcacttcgctttcttcaa
acttatcatggagcggagattgatattgattcctatgatatccagatagttaaacttgca
ggccttctgcatgacattggccatggacctttcagtcacttatttgaacatgaatttctt
cctcaagttctccctggatcagagtggtcgcatgaacaaatgtcaatagagttggtggat
tacatggttgatgagcaccacattgaaattgattctgaccatcttagaaaagttaaagaa
atgatcgtagccagctccaagtttgctgtaccaaggagttcgaaagagaagcaatttctg
tatgacattgttgctaatggtcgcaatggaattgatgttgacaagtttgattatattgct
cgtgactgcagagcttgtggccttggctgtaattttcaatttcaaagattgtttgaaggg
atgcgtgttatgggtgatgagatatgctatccagcaaaagagtacctcagtattcacaaa
ttgttttcggcacgtgctgatcttcacaggactgtgtatactcactccaaagtaaagagc
atcgaactaatggctgtggatgcacttgtaaaagctaatggttacctgaaaatatcttca
tatccctttgatcctgctgaatactggaagttggacgacacaatattaaaaaccattgag
tttgctgacagcaaaaaactgaaagaatctaaagaaataatccagcgcatacgccgtagg
gatttatatcagttctgcaatgaatatgctgttccaaaggagaaactagagcatttcaag
aacatcactccacaagatattatatgttctcagaaagctaatggaataaatttgaaggca
gaagatattgttgtgagcaatgtcaaaattgatttgactcgagggaaacacaaccctctc
gagagcatcagctttttcaaggattattacagtgaggagaaatttaacatcacagacgat
cgcatcagccaccttctgcctgcctgctgtcaagacagaattgtgagagtttatgccaag
aaaccagaattggtagaggcagtttctgaggcttttgagaatctccaactgaaaatgtac
ggagtcaaaactcaagttcatgaaacaccagagaagaagagacgacgggcatag

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