Zingiber officinale (ginger): 122040875
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Entry
122040875 CDS
T08725
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122040875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122040875
04147 Exosome [BR:
zof04147
]
122040875
04090 CD molecules [BR:
zof04090
]
122040875
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122040875
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122040875
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122040875
CD molecules [BR:
zof04090
]
Proteins
122040875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
AAA_30
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
122040875
NCBI-ProteinID:
XP_042456283
LinkDB
All DBs
Position
2A:complement(17970216..17989988)
Genome browser
AA seq
1402 aa
AA seq
DB search
MMGSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYTDGGVDPVAPEDEGGEEDMEEIEPPP
AAVPFSRLFAYADRVDWALMAVGAVAAAAHGIALVIYLHLFGQAIDLLRYESEGSRLHND
GDLVLRKMKDHALYIVYIAISVLVAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFF
DTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLVVGLVNCWQIALLTLASG
PFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAISYIRTLYAFTNETLAKYSYATSLQ
ATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLISHQKANGGEIVTALFAVILSG
LGLNQAATNFYSFEQGRIAAYRLFEMISRSNSSINQEGSILGSVQGNIEFRNVYFSYLSR
PEIPILSGFFLTIPARKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLE
WLRGQIGLVTQEPALLSLSIRDNIAYGRSATSDQIEEAAKTAHAHGFISSLAMGYETQVG
RAGLTLTEEQKIKISIARAVLSNPSILLLDEVTGGLDFEAESAVQEALDILMLGRSSIII
ARRLSLIRNADYIAVMEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRTPIRNYKD
SNLQTERASSGTQRLQEPSSPTLSKSPSLQRGEDLLLTNQQDASYNSHESSKSHSPPPEL
TLENGMALEKFTSFKRQDSLEMRLPELPKLHVHSINRQSSKTSDPESPISPLLTSDPKNE
RSHSNTFSRPINLFDMVHVKRKEVNEFQQHKPPSFWRLVELSFTEWLYALLGSIGAAIFG
SFNPLLAYTIALIVAAYYRIDGVRDVHNEVNRWCLFIACMGIVTVVANFLQHFYFGIMGE
KMTERVRRMMFSAILHNEIEWFDDEENSADTLSMRLANDATYVRAAFSNRLSILVQDIAA
VAVAFLIGLLLDWRVALVALATLPILTVSAVAQKMWLAGFSKGIQEMHRKASLVLEDAVR
NIYTVVAFCAGNKIMELYRLHLSTILKQNFTLGMTIGFAFGFSQFLLFACNALLLWYTAI
SVHHGRLKVATALKEYIVFTFATFALVEPFGLAPYILKRRKSLTSVFEIIDRVPKIDSDD
NTGINPPNIYGSIEFRNVDFFYPTRPEAMILSNFSLKVSGGQTVAVVGVSGSGKSTIISL
IERFYDPVCGQILLDGRDLKLFNLRWLRSHMGLVQQEPVIFSTTIRENIIYARHNATEAE
MKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASS
AIESESSRVVQEALDTLIMGNKSTILIAHRAAMMRHVDNIVVLNSGRIVEQGTHESLLQK
NGLYVRLMQPHFGKGLRQHRVV
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctccagggggctgttcggctggtctccgccacacgtacagcccctgacgccg
gtttcggaggtgtcggagccacccgagtcgccctcgccgtacacggacggcggggtggac
ccagttgccccggaggacgagggcggcgaggaggacatggaggagatcgagccgcccccg
gccgccgtacccttctcgaggctcttcgcctacgcggaccgtgtcgattgggcgttgatg
gcagtcggcgctgttgcggctgccgcgcacgggatcgcactggtgatctacttgcatctt
ttcgggcaagccatcgatctgttgcgctacgagagcgagggatccaggttgcacaacgac
ggtgaccttgtattaaggaaaatgaaggaccatgccctgtacatcgtttatattgctatt
tctgttctggttgctggttggatagaggtctcttgctggattctaactggagagaggcag
actgcagtcataaggtcaaagtatgttcaggtcttactaaaccaagacatgagttttttt
gatacatatgggaacaatggagatatagttagtcaagtactgagtgatgtcctgctcatc
caatctgctttaagtgagaaggttggaaactatattcataacatggcaacattctttggt
ggccttgtcgttggtttggttaactgttggcagatagcacttctaaccctagcaagtggt
ccttttattgttgcagctggagggatatctaatatttttcttcatagactcgccgaaaat
attcaagatgcatacgccgaagccgcaagcatagcagaacaggcgatctcatacattagg
acattatatgccttcacaaatgaaacccttgcaaagtattcttatgcaacctcacttcag
gcaacacttagatatggtatattgattagtcttgtgcaaggccttggtcttgggtttaca
tatggacttgctatatgttcttgtgctttacaactttgggttgggagattccttatttca
catcaaaaagctaatggtggagagatcgtgacagctttatttgctgtaatcttaagtgga
cttggactaaatcaagcggctacaaacttttattcatttgaacaaggaagaattgctgct
tatagactttttgagatgattagccgttcaaactcttctattaatcaggagggaagcatt
ctaggttcggtgcaaggaaatattgagttcaggaatgtgtatttcagttatctttctcga
ccagaaattcccatattaagtggtttcttcctaaccattcctgctcgaaaagctgtggct
cttgttggtcgcaatggatctggaaaaagcagtatcattcctcttatggaacgattctat
gatccaacactcggtgaagttcttttggatggggagaatataaaaaatttgaagctggag
tggttgagaggccaaataggattagttacccaggagcctgctttgttaagtttgagcatc
agggataatattgcttatggaagatctgctacatctgatcagattgaggaggctgctaaa
acagctcatgcacatggattcattagttcccttgcaatgggatatgaaacacaggttggc
agagcaggtttaactttgacagaagaacaaaaaataaagatttcaattgcccgtgctgtg
ctttcaaatccttccatacttttactagatgaggtcacaggtggactcgattttgaggca
gaaagcgctgttcaggaggctttggatatcctcatgctgggaaggtccagtataataata
gccagacgccttagtcttatccgtaatgctgactatattgccgtaatggaagaaggtcaa
cttgtggaaatgggcactcatgatgagctattgaatcttgatggtctgtatgctgaactc
ttgagatgcgaggaggcagcaaagcttcctaagaggacgcccatcaggaattataaagat
tcaaatcttcaaactgagagggcttcatcagggactcagagacttcaagaaccatcatct
cctactttgtcaaagtcaccttctcttcagagaggagaagatcttctcttaactaatcag
caagatgccagttataactcacacgagtcatcaaagagtcatagcccacctccagaactg
actctggaaaatgggatggcattggaaaaatttacatccttcaaaaggcaggacagcttg
gagatgaggttgcctgagcttcccaaactacatgttcattccattaacaggcaatcttca
aaaacatcagacccagaatctcctatttccccacttctgacatctgatcctaaaaatgag
cggtctcattcaaatactttcagtcgtccaattaatctgtttgatatggttcatgttaaa
aggaaagaggtgaatgagtttcaacaacataaacctccatcgttctggcggcttgtggaa
ctcagttttactgaatggctttatgctcttctaggaagtattggtgctgcaatatttgga
tcattcaatcctctccttgcttatactattgcacttatagtagcagcatattatagaata
gatggtgtccgtgatgtacacaatgaagtaaataggtggtgcttgttcattgcctgcatg
ggtattgtcacagtggttgcaaactttttgcaacacttctacttcggtataatgggagag
aaaatgactgaacgagttaggaggatgatgttctctgcaattttgcacaatgaaattgag
tggttcgatgatgaagagaatagtgcagatacattgtcaatgcgattggctaatgatgca
acctatgttcgtgctgcattcagcaaccgcctctctatattagtacaagacattgctgct
gttgccgttgcatttcttataggtttgctgttagattggcgtgtggcactcgttgcactg
gcaactctacccatcctaactgtttctgctgttgcacagaaaatgtggcttgctggattt
tcaaagggaattcaagagatgcacaggaaagcctctttagtccttgaagatgctgttaga
aatatctatactgttgttgccttttgtgctggtaacaagatcatggagctgtatagattg
cacctttctaccatactgaaacagaatttcacccttggaatgacaattggttttgctttc
ggcttctcacagttcctcctttttgcctgcaatgctcttcttctttggtacacagctatt
tcagtacaccatggccgactcaaagtagccacagcacttaaagagtacattgtctttact
tttgcaacctttgctttggtagagccatttggtcttgcaccttacatactaaagcggcgg
aagtctcttacttcagtgtttgaaatcatagatcgtgtaccaaagatcgattcagatgat
aatactggcataaaccctcctaatatatatggaagcattgaattcagaaatgtagatttc
ttctacccaactcgacctgaggcaatgattctcagtaacttcagtcttaaggtgagtgga
gggcaaacagtggcagtagtgggggtgtctggatcaggaaagagcacgataatatctctg
attgagagattctatgatcctgtttgtggccaaattttgttggatgggcgagatctgaag
ctctttaacttgagatggttgcggagccacatgggccttgttcaacaggaaccagtcata
ttttcaacaaccataagagagaatataatctatgcgaggcataatgcaactgaagcagag
atgaaagaagcagcaaggattgcaaatgcacatcatttcatcagcagtttgccgcatggt
tatgacactcatgtgggcatgagaggggttgatttgactcctggacagaagcaaagaatt
gccattgctagggtggtactaaagaatgcacctatactgttgttagatgaggcaagctct
gcgatagaatctgagtcgagtcgagtggtgcaggaggcactcgacaccttgatcatgggg
aacaagtcaacaattcttatcgcgcatagggcagcaatgatgaggcatgtggacaatatt
gtggttctaaatagtggcaggatagttgagcagggcacccacgagtcactattgcagaag
aacggattgtacgtaaggttgatgcagccacattttgggaagggccttcgacagcatcgg
gtcgtctag
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