Zingiber officinale (ginger): 122041076
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Entry
122041076 CDS
T08725
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122041076
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
122041076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
122041076
NCBI-ProteinID:
XP_042456566
LinkDB
All DBs
Position
2A:43283645..43367747
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AA seq
788 aa
AA seq
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MAEKQLIVVVEGTAALGPYWQTIRNDYLEKIIRCYYGNELTGQKLNGTNPEFALVVFNTH
GPYNDIVVQRSGWTKDLDIFLQWLSTMCFSGGGFSEAAIAEGLSEALMMLLVSINASDNH
QSPEVQKHCVLVAASNPYPLPTPVYRPPISSLEHKENTEVQKESFLADAETVAKSFSQCF
VSLSVISPKQLPKLRSIYNAGKKNPHAADPSVDHVRNPNFLVLLSESFVEACAALSRTLL
PNQSISSQGIGKIDGSSTVPISGLPATANPSVNGTIMPRQPITVGSIPTATVKVEPATVS
SMVSGPGFSHISSITNVPSQGVSNLQNSSPSHSSQEMNANIDTTQEIKPLLNPLSQPLRP
AVPAPANVNILNTISQHRTPVAVHMSNMISSGMASSAHSAISSVSGSGQPMAVTQVTQNS
PLGSLASVTSNLGGNSSIGIPPTLNTLQGNMTIGLSASNVGQGTLTSGAQISQVGITINQ
NMMNNLVSSSVSSGPGTMIPTPGMSQQAGSHSLEIANNTAINMPLVQQTSNIQQSQSKYV
KIWEGQLSGQRQGQPVFICRLEGYRSQTASDSFVARTELVNCLHKLSKALIVNCMKRNSF
LINPVAADWPSVMQIVRLIAQEHMNNKQYVGNADFLVFRTLNQHGFLGQLQEKKLCAVIQ
LPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVPSQQQQLQQLQPQSQSHLHLQQQHMQQ
QQLQQQAQQHQHLQVQQPAQQQQQQQPQQIVGAGISQTFIQGHGRSQIMTQGRLPQAGPT
NLPGGFLP
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaagcagctgatcgtggtggtggaagggacggctgcccttggcccctattgg
cagaccatccgcaacgattacctcgagaagatcatcaggtgctattatgggaatgagtta
actgggcagaaacttaatggaacaaaccctgagttcgctttggttgtcttcaacacacat
ggcccttataatgatattgtggtgcaacggagtggttggacaaaagacttggatattttc
ctccagtggctatcaacaatgtgcttttctggtggtggttttagtgaagctgccattgct
gaaggcctttctgaagcattaatgatgcttctagtctctataaatgcatcagacaatcac
caaagccccgaagtacaaaaacattgtgtccttgttgctgccagcaatccctaccctctc
cctactcctgtctatcgacctcctatctcaagtttagaacacaaggagaatactgaagta
caaaaagagagtttccttgctgatgctgagaccgttgcaaaatcatttagccagtgcttt
gtctcattgtccgtgatttcacctaaacaactacccaaattgagatctatatataatgcg
ggaaagaaaaatcctcatgctgcagatccatcggtagatcatgttagaaatcctaatttt
ctagttttactctcagagtcctttgttgaggcttgtgctgctctaagccgcactttattg
ccaaaccagagcatctcaagtcaaggaattggaaagatagatgggtcatccactgtccct
atttcaggactgcctgcaactgctaacccatcagtaaatggaactataatgccccgtcaa
ccaataactgttggaagcatcccaactgcaactgtaaaagtggagccagctactgtttct
tctatggtgtctggtcctggtttttcacatatatcatcaattactaatgttccttctcaa
ggagtttccaacctacagaattcttctccatctcatagctctcaggaaatgaatgcaaat
attgacacaacacaggaaatcaaaccattattaaatcctctctcacaaccattacgccct
gcagttcctgctccagctaatgtcaacattcttaatacgatttcccaacatcgaacacct
gtggcagttcacatgtcgaatatgatctctagtggtatggcgtcatctgctcattcagcc
atttcttcagtctcggggtcaggacaaccaatggctgtgacacaagttactcaaaattca
ccacttggttcacttgcatcagtcacttctaatttaggtggaaactcaagtattggcatt
ccacccacactgaatactcttcaaggaaatatgacaataggtctttcagcatcaaatgtt
ggacaaggaacattaacatcaggtgcacaaataagccaagttggaataacaataaaccaa
aacatgatgaacaatcttgtatccagctccgtctcctctgggcctggaaccatgatcccg
acacctggaatgtctcagcaagctggatcacattcacttgagatagctaataatactgca
atcaatatgcctttggtgcagcaaacttcaaatattcaacagtctcagtccaaatatgtt
aaaatttgggagggacaattgtctggccagagacaagggcaacctgtgtttatttgtaga
cttgaaggttatagaagtcaaacagcatcagactcgtttgtagcccggaccgaattggtc
aattgcctccacaaattgtctaaagctttgattgtaaattgcatgaaaaggaattccttc
ctcataaatccagtagcagccgattggccatcagtcatgcaaattgtacgcctcatagca
caagagcatatgaataacaagcaatatgtggggaatgcagactttttggtatttcggaca
ctaaatcagcatggatttcttggacaattgcaagaaaagaagctttgtgcagtcatccag
ttaccttcacagacattgcttctctctgtctctgacaaagctggtcgattaattggcatg
ctttttcctggggatatggtagtcttcaaacctcaagtcccaagtcagcagcagcagctt
caacagctgcaaccacaatcgcagtcccacttacatctccaacagcaacatatgcagcag
caacaacttcaacagcaggcacagcagcatcagcatcttcaggttcagcagccggctcaa
cagcagcagcaacagcagccgcaacaaatcgttggggctggaatcagccaaacatttatt
caaggacatggcaggtcccaaatcatgacacagggaaggctacctcaagcagggccaacc
aatttgcccggaggttttttaccttag
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