Zingiber officinale (ginger): 122042453
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Entry
122042453 CDS
T08725
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122042453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122042453
04147 Exosome [BR:
zof04147
]
122042453
04090 CD molecules [BR:
zof04090
]
122042453
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122042453
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122042453
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122042453
CD molecules [BR:
zof04090
]
Proteins
122042453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_5
AAA_15
Zeta_toxin
DUF87
AAA_21
DEAD
DUF815
G-alpha
nSTAND1
AAA_30
Motif
Other DBs
NCBI-GeneID:
122042453
NCBI-ProteinID:
XP_042458522
LinkDB
All DBs
Position
2A:complement(141402934..141408616)
Genome browser
AA seq
1281 aa
AA seq
DB search
MASEEQNDAASTSKAAATDQEHESSSQNDNQDKGKHTVPFYKLFSFADSTDAILMVLGTL
GAVGNGLALPLMTVLFGNLIQSFGGESNPHDVLHEVSKVALQFVYLAIGAGVASFLQVAC
WMATGERQSARIRSLYLNTILRQEIAFFDKETNTGEVVERMSGDTVFIQDAMGEKVGKFI
QLIASFVGGFVIAFIEGWLLTLVMICSIPPLVLAGGLMANVISKMASRGQTAYGEAATVV
EQTISSIRTVASFTGERLAVTKYDKSLARAYHASVQEGLVAGLGLGAVMLFFFAGYSLGI
WYGAKLILERDYTGGKVINVIFAILTGSFSLGQVAPCITAFVAGQAAAYKMFQTINRKTE
IDPYDPKGKKLDDIQGDIELKDVYFSYPTRPDEQIFNGFSLAIQKGTTVALVGESGSGKS
TVVSLIERFYDPQAGEVLIDGVNLKEFQLRWIRGKIGLVSQEPVLFATSIRDNIAYGKEN
ATVEEIRAAAELANAAKFIDKLPQGLDTLVGDHGTQLSGGQKQRVAIARAILKDPRILLL
DEATSALDAESERIVQEALDRVMTNRTTVVVAHRLSTIQNADTIAVVHRGSIVEKGSHDK
LLENPNGAYSQLIRLQEMNPESVSINRPDSKKSDVWVGSARSSSKKLSMHRSNSLGSSGR
HSSSNSFQISFGLPVSVDVQDQSENVDPERPAEQAKEVPLRRLAYLNKPEIPVLILGSIA
AVVNGVIFPVYAILLSNVINAFYERDPHKLKKDSNLWSLMFLIFGGISLLAIPARTYFFG
IAGAKLIMRIRLMTFQKVVNKEIEWFDNPGNSSGAIGARLSADAASVRSLVGDVLSLIVQ
NITTLITGLVIAFVSNWQLSLIILALVPLLGFNGYVQMKFIQGFSKDAKIMYEEASQVAT
EAVGSIRTVASFSAEEKIMTMYKQKCEGPTTKGIRQGIISGTGFGVSFFLLFCVYGASFY
AGARLVDSGKTTFAKVFRVVFALAMAAIGISQSSSLAPDSSKAKTAAASVFAILDQKSKI
DSSDDSGVTPERLKGNIEIRHVSFRYPTRPDIQIFQDLCLSIHSGKTVALVGESGSGKST
VVSLLQRFYNPDSGEILLDGIEIQKFQLRWLRQQMGLVSQEPSLFNDTIRTNIAYGKEGN
ATEAEIISAAELSNAHKFISSLQKGYETLVGERGVQLSGGQKQRVAIARAIVKDPKILLL
DEATSALDAESERVVQEALDQIMVNRTTVVIAHRLSTIKGADVIAVVKNGVIVEQGKHET
LMKIKDGAYASLVALHVSSAH
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgaagagcaaaacgatgctgcatctacttctaaggctgcagcaactgatcag
gagcatgaatcctccagccagaacgacaatcaggataagggcaagcacactgtgccgttt
tacaagctgttctccttcgcagactcgacggatgcaatcttgatggtccttgggacgttg
ggtgccgtagggaatggacttgctcttcccctcatgactgttctttttggaaatttaatc
cagtcctttggaggagagtccaacccacatgatgttctccatgaggtttccaaggtagca
ctgcagttcgtctatctagcaatcggagcaggcgtggcatccttcttgcaggtggcttgt
tggatggctactggggaaaggcaatcagcacgaataaggagcttgtatttgaatacgata
ctaaggcaagagattgcattttttgacaaggaaacaaatacaggtgaagtcgtcgagagg
atgtcgggggatactgtatttattcaggatgccatgggcgagaaggtgggcaaattcatt
cagctaattgcaagctttgttggaggatttgtaatagcatttatcgaggggtggttattg
accctcgtgatgatatgctccattcctcctttggtgcttgctggaggactcatggccaat
gtcatctccaaaatggcttcgcgaggacaaacagcttacggagaagctgcgaccgtcgtc
gagcagaccatcagttcaattagaacagttgcttcatttacaggagaaagactagcagta
acgaagtacgataagtctttggcaagggcctaccatgcgagtgttcaggagggtcttgtg
gctggattaggtctcggcgcagttatgctcttcttttttgctgggtactccttgggaata
tggtacggagcgaaattgatactggaaagggattacactggtggcaaggtcatcaatgtg
atatttgcaatcctcacgggatccttttcattaggccaggtagcaccatgcattacggca
tttgtagcaggacaagctgctgcttataagatgtttcagacgattaaccgaaagacagaa
atcgacccgtacgatcccaaaggaaagaagctcgacgatattcaaggggatattgaattg
aaagatgtttacttcagctatccaactagaccagatgagcaaatctttaatggattctct
ttggccattcagaaagggactacggttgcattggtcggtgagagtggaagtggaaagtcg
acagttgtcagtttgattgagagattttacgatcctcaggctggtgaagttctcatcgac
ggggtgaacctcaaggagtttcaactcaggtggattagagggaaaattgggcttgtgagt
caggaacctgtcctgttcgccactagcattagagacaacatagcctatggcaaggagaat
gcaactgttgaagaaatcagggctgccgcggagcttgctaatgctgccaaattcatcgat
aaattgcctcagggtttggacactctggttggggatcatggaactcagctttctggaggt
caaaaacaaagagttgccattgcccgagcaattctgaaagatcctcgtattttgcttttg
gatgaagctacaagtgcgctcgacgcagaatcagagaggatagtacaggaagcacttgat
agagtcatgacaaaccgtactaccgttgtagttgctcaccgactaagcaccattcaaaat
gcggataccattgctgtggtacatcgaggatcaattgtcgaaaagggttcacatgataag
ctactagagaatccaaatggagcttatagccagcttatacgactgcaagaaatgaaccct
gaatcagttagtataaacagacctgattcaaaaaaatctgatgtgtgggttggttcagct
aggtcctctagcaaaaaattgtccatgcaccgttccaatagccttggatcatcaggcaga
catagcagcagcaattcctttcaaatttcatttggtttgccggtaagtgtcgatgtacaa
gatcaatctgagaatgtggatccagaaagacctgctgaacaggcgaaagaagtaccgctc
cgtcgcctagcatatcttaataagcccgagattccagtgttgatccttggttcaattgcc
gcagtcgttaatggtgtcatatttccagtctacgcaattcttctttcaaatgtgattaat
gcattctacgagagggacccacacaagctcaagaaagactctaacttatggtcgttaatg
ttcctgatatttggcggcatttctttattggctattccagctagaacatacttctttggt
attgcaggagccaagttaataatgaggattaggctaatgacatttcaaaaagtggttaac
aaggagattgaatggtttgataatcctgggaactctagtggtgcaattggggcaaggcta
tcagcagatgcagcttcagtcagaagtcttgtgggagatgtactttcattaattgttcag
aacattacaacattgatcaccggtttggtgattgctttcgtctccaattggcaactctct
ttaataatcctagcgttggtgcctctcttgggattcaatggatacgtacagatgaagttt
atacagggatttagtaaggacgcaaagataatgtacgaggaagccagtcaagttgcaact
gaagcagtaggaagcatcagaacagttgcttcattttctgccgaagagaaaatcatgacc
atgtacaaacagaaatgcgaaggccctacaacaaaaggaattaggcaagggattatcagt
ggtactggcttcggtgtgtccttcttcttgctgttttgtgtctatggagctagcttttat
gcaggagcaaggttggttgacagtggaaagactacttttgccaaagtattccgggttgtt
tttgctcttgcaatggcagccattgggatatctcaatcaagttccttggcaccagattcc
tccaaagccaaaactgctgcagcttcagtatttgccattcttgaccaaaaatctaaaata
gattctagtgatgattcaggcgtgacaccggagagattgaagggaaacatcgaaatacgg
catgtgagtttcaggtaccctacacgcccggatatccagattttccaggatctatgcttg
tcaatccactctggaaagacggttgctcttgttggagagagcggcagtgggaagtcgact
gttgtatcactgttgcagcgattctacaatcctgattctggagaaatattgctagatggt
atcgaaattcaaaagtttcaactgaggtggttgaggcagcagatgggcttggtgagccaa
gagccatctctctttaacgatacaattcggactaatatcgcttatggaaaggagggaaat
gctacagaagctgagatcatatctgctgcagaattgtctaatgcccacaagttcattagt
agtttgcagaagggctatgaaacattagtcggggaacggggagttcagctctctggtggg
caaaaacagcgtgttgctattgcacgtgccatcgtgaaggacccaaagatcctattgctg
gacgaggcaacgagcgcactggatgctgaatctgaaagagtggtccaagaagcattagac
caaatcatggtcaatcgaaccactgttgttatagctcatagattatctaccataaaggga
gcagatgtgattgctgtggtcaagaatggagtgatagtagagcaaggaaagcatgagacg
ctgatgaagatcaaagatggcgcttatgcttccttggtcgcacttcatgtgagctctgca
cactga
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integrated database retrieval system
