Zingiber officinale (ginger): 122042542
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Entry
122042542 CDS
T08725
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5B
KO
K14963
COMPASS component SWD3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122042542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122042542
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
122042542
NSL complex
122042542
HMT complexes
COMPASS/SET1 complex
122042542
COMPASS/SET1 complex (yeast)
122042542
MLL-HCF complex
122042542
MLL3/MLL4 complex
122042542
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122042542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
WD40_like
eIF2A
Nup160
PROPPIN
Motif
Other DBs
NCBI-GeneID:
122042542
NCBI-ProteinID:
XP_042458643
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All DBs
Position
2A:complement(145799575..145802644)
Genome browser
AA seq
320 aa
AA seq
DB search
MSAPVPGGASSTTAEPPPYRPYTLAHVLTGHSRAVSCVKFSNDGLLLASASLDKTVIIWS
AKTFAAVSTLIGHAEGVSDVAWSSDSHYICSASDDRTLRVWDVRPPTDCVRILRGHLSLV
FCVDFNPPSDRIASGSFDQTVRVWDVKSGKCVKTIEAHDEPVTSVHFIRDGSIIVSGSRD
GSCKIWDAVSGACLKVLIDDKTPAVSFAKFAPNGKFILIATLDDTLKLCNYALGKFLKVY
TGHVNRQYCITSTFSVTNGKYIVSGSEDNCVYIWDLQSKQIIQKLEGHTDTVISVTCHPM
ENKIASAGLHNDRTVRIWVQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccccgtccctggtggtgcctcctccaccacggcggagccgcctccctatcgg
ccttacactctcgcgcacgttctcaccggccattcgcgcgccgtctcatgcgtgaagttc
tccaacgatggcctcttgctggcttctgcctctctcgacaagaccgtcatcatctggtcc
gccaaaaccttcgccgctgtctctaccttgatcggccatgctgaaggcgtatctgacgtc
gcctggtcctctgactcccactacatctgctctgcctccgacgatcgcacgctccgcgtc
tgggacgttcggcccccaaccgactgcgtcaggatcctccgcggccacctctccttggtt
ttctgcgtcgacttcaaccccccttccgatcgcatcgcctccggctcgttcgaccagact
gtgcgggtctgggatgtcaagagtggcaaatgcgtcaagacaattgaggcgcacgacgaa
ccagtaacctctgtccattttattcgggatggatcgatcatcgtctcaggtagccgtgac
gggtcgtgtaagatctgggacgcggtgtcaggggcgtgcctcaaggtgcttatcgacgac
aagacacctgctgtgtccttcgccaagttcgcccccaatggaaagtttattcttattgct
accctcgatgacaccctgaagttatgcaattatgcattggggaagttcttaaaggtttat
acaggccatgtcaaccgacaatactgcatcacttctaccttttctgtcacaaatggtaaa
tatatagtcagcggctcagaagataactgcgtctatatatgggaccttcaaagtaaacag
ataattcaaaaactggaaggccacaccgacacagtcatctcagttacttgtcatcccatg
gaaaacaaaattgcttctgctggccttcataatgatagaacagtcaggatttgggttcaa
tag
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integrated database retrieval system
