Zingiber officinale (ginger): 122043083
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Entry
122043083 CDS
T08725
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122043083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122043083
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122043083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
Gelsolin
zf-Sec23_Sec24
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
122043083
NCBI-ProteinID:
XP_042459475
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All DBs
Position
2A:complement(166325035..166331616)
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AA seq
782 aa
AA seq
DB search
MAEELAGTGAAASDPDGPDGVRMTWNNWPRTKVEASKCIVPVAASISPIRPSPTLLVLPY
HPLRCKPPCFAVLNPFAVVDFAAKIWICPLCFTRNHFPPHYAGISENNMPGELYPQCTTV
EYAPPPLDHLSSPPPPPPVFLFVIDTCIIEEELVFLKSAMRRAIGLLPDNALVGLLTFGR
MVQLYELGFTEVSKIYVFKGTKEIPKEQILDQLGLSTTNVRHGAVIGAPGYPKSPQSNGF
HPSGSVNRFLLPAADCEYALNTLLDEMQTDQWPVEAGSRSLRCTGVALSVAAGLLGACMP
GTGARIIALVGGPCTQGPGMIVSKDLSDPVRCHKDLDKDAAPHFHKAVKFYDNLAKQLVN
QGHVLDLFASALDQVGVAEMKVAVERTGGLVVLAESFGHPVFKDSFKQIFEDGEQSLGLS
FNGTLEINCSKDIKIQGIIGPCTSLEKKGALCADTVVGQGNTTSWKMCGLDRSTCLTVFF
DISTTERSNQSGIPNPQLYIQFLTNYQGPEGQMRLRVTTVTRKWADSSNTEELVQGFDQE
TAAVVLARFTSLKMEMEEGFDATRWLDRSLIRLCSRFGDYRKEDPASFTLNPNFSILPQF
MFNLRRSQFVQVFNNSPDETAYFRMMLNRESITNSVVMIQPSLLLYSFNSPPVPALLDVA
SISADRILLLDAYFSVVIFHGMTIAQWRNMGYQNQPEHQAFAELLQAPQDDAQTIIRERF
PVPRLVVCDQHGSQARFLLAKLNPSATYNSSHEVAVGSDIIFTDDVSLQIFCEHLQRLVV
QS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaactcgccggcacgggcgccgccgcttccgatccggacggtcctgacggc
gtccgcatgacctggaacaattggccccgcacaaaggtggaagcgagcaagtgcatcgtc
cctgtcgcggcctccatctccccgatccgcccatcccccaccctcctcgtcctcccttac
caccctctccgatgcaaaccaccgtgcttcgccgtgctcaaccccttcgctgtcgtcgac
ttcgcggccaagatctggatctgccctctctgcttcacccgcaaccatttcccccctcac
tatgccggaatcagcgagaacaacatgcccggcgaactctatccccaatgcactacggtg
gagtacgctcccccgccccttgaccacctgtcgtcccctccgccgccccctcctgtgttc
ctattcgtgatcgacacttgcatcatcgaggaggagctcgtgttcctcaagtcggccatg
cgtcgtgccataggccttctccctgataatgcgctcgtcgggctgctcacgttcggcaga
atggtccaactttacgagctagggttcacggaagtctccaagatctacgtgttcaaaggg
accaaggaaattcccaaagagcagatcttggatcaactcgggctatctactaccaatgtc
cggcatggcgctgtaattggagctccaggatatcccaaatcgccgcagagtaatggattt
catccatctggttcggttaatagattcctgcttccagcagcggattgtgaatacgctttg
aatactttgttggatgagatgcagacggatcagtggccagtcgaagcagggagtcggtct
ctacgttgcactggggtggctctaagtgttgctgctggcctccttggagcatgcatgcct
ggtactggggctcgtatcattgctttggtcggtggaccatgcacccagggccctggaatg
attgtgtcaaaggatctgtcagatcccgtgcgatgccacaaagatcttgataaagatgca
gctccacattttcacaaggctgttaaattctatgataatttagccaaacaactggttaac
cagggccacgtattggacctatttgcttctgcccttgatcaggttggagttgcagagatg
aaagtagcagttgaaaggactggcgggcttgttgttcttgcagaaagttttggccatccg
gttttcaaagactcattcaaacaaatttttgaagatggagagcaatctcttggcctttct
tttaatggcacacttgagatcaactgctcgaaggatatcaaaattcaggggattattgga
ccatgtacttccctagagaagaagggagctctttgtgctgatactgttgtaggtcaagga
aacacaacgtcatggaaaatgtgtggccttgataggagcacttgtttaacagtattcttt
gatatttcaactactgaacgatcaaaccaatctggaattcccaatccacaattatatata
cagtttttgacaaattaccagggccctgaaggtcaaatgaggttacgtgttacaactgtt
accagaaaatgggcagatagttctaacacagaggaattggttcaaggatttgaccaggaa
acagctgcagttgttttggcaagattcacctccttgaaaatggaaatggaggaaggattt
gatgcaacaagatggttggatagatctcttatccgcctttgctcaagatttggtgattat
cgaaaggaggaccctgcttcatttacattgaatccaaatttctcaatacttccacagttc
atgttcaacctgaggcgctcacaatttgtacaggtttttaacaacagcccagatgaaaca
gcttatttccgcatgatgttgaatcgcgaaagcatcactaattcagttgtcatgatacag
ccttcacttcttttatattcttttaactcgcctcctgttcctgcactattggatgtggca
tctatatctgcagatcgtatacttctgctagatgcttacttcagtgttgttatcttccat
ggtatgaccattgcccaatggcgcaatatgggttaccaaaatcagcctgagcatcaggca
tttgctgagctgttacaagctcctcaagacgatgcccagacgatcatcagagagcgtttt
cctgttccaagattagttgtttgtgaccaacatggctcccaggcaagattcttgttagca
aagttgaatccatctgccacatataactctagccatgaggtggccgtgggctctgatatc
atcttcaccgacgatgttagtcttcaaatattctgcgagcatcttcagaggctggttgtt
cagtcataa
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