Zingiber officinale (ginger): 122047804
Help
Entry
122047804 CDS
T08725
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122047804
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122047804
04147 Exosome [BR:
zof04147
]
122047804
04090 CD molecules [BR:
zof04090
]
122047804
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122047804
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122047804
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122047804
CD molecules [BR:
zof04090
]
Proteins
122047804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
ABC_ATPase
AAA
AAA_29
RsgA_GTPase
SbcC_Walker_B
DUF87
AAA_15
AAA_24
AAA_30
APS_kinase
DUF3487
Motif
Other DBs
NCBI-GeneID:
122047804
NCBI-ProteinID:
XP_042465220
LinkDB
All DBs
Position
2B:complement(149809763..149814146)
Genome browser
AA seq
1224 aa
AA seq
DB search
MDEGNKVEGKAEEGESRPRTGIFLFADWADVALMAAGTLGAVGDGCSINCLLLFASAVMN
SLGTGDAQNHADFMQDVKKHCLYFVYVGLATLVVAFMEGYCWSRTSERQVLRIRHKYLEA
ILRQEVAFFDSQEATTAEVINSISKDTALIQEVLSEKVPLFIMHSSTFISGLAFSTYFSW
RLSLVALPLVGVLVIPGLIYGKYLVYLSRESREAYGKANAIVEQALSSIKTIYSFTAEKS
IAERYSVILEKTVRLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSGLVMYHGESGGRIYA
AGISFVLGGLSLGMALPEVKHFAEASVAAKRILERINRRPRIDAEDPKGLKMEEMHGEVA
FESVQFAYPSRPEVPVLRDFSLRVPAGQTVALVGTSGSGKSTAVALLQRFYDADAGAVRI
DGVDIRKLQLKWIRAKMGLVSQEHALFGTSIRENILVGKPGAAAGEIFAAAMTANAHNFI
RQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPAILLLDEATSALDSESEKLVQNAL
DQASMGRTTLVVAHKLSTIKNADQIAVVDCGRIVEIGTHDELIAEKNSHYSRLVKLQRIP
SNLDPEPESFRPSSVARSSASRLSLTKASPAFSEDQSTASVAASPAPSFSRLIAMNAPEW
KQAVVGSLSAVVFGSVQPIYAFSIGGMIAAFFLQDHDEMKAAIRRFALIFSALSLVSIIV
NLLQHYNFAYMGERLTKRIRIRALEKILTFEVAWFDDDEHSSGALCSRLSHEAALVKTLV
ADRLSLLLQTASGVVVAMTMGLAIAWKLALVMIAIQPSTMICHYAKKVVLSRVSVALAKA
QHSSTQIAIEAVYNHRMVTSFGCADKVLELFKEAQEEPVRASRKKAWVAGLATGSAPCLS
FLSWALDFWYGGRLAQSGEISAGDVFKTFFILVSTGKVIAEASSMTSDLAKGATAVASVF
EVLDRQSFISTSSSPSSNGETKQIQGKIEIRKVDFTYPTRPLCPVLRDFSLEVKAGTSVG
FVGRSGCGKSTVVSLILRFYDVDRGVVRIDSTDVRELDLIWFRGFTALVSQDPVIFSGTV
RDNIALGKPSATEDEIVEAARAANAHNFISSLKDGYGTNCGERGAQLSGGQKQRIAIARA
IVRNPRILLLDEATSALDVESERAVQEALDRIMVGRTTVVVAHRLNTIKKVDSIAFLGEG
KVVERGSYAQLMAKKGAFFDLAAP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggggaacaaggtagaaggcaaagctgaagaaggcgaaagccgaccaagaact
gggattttcctgttcgctgattgggccgacgtcgctctgatggcggcggggacgctcgga
gccgtcggcgacggctgctccatcaactgccttcttctcttcgcgagcgccgtcatgaac
agcttaggcaccggcgacgctcaaaaccatgcagacttcatgcaggacgtgaaaaagcac
tgcttgtacttcgtgtacgtgggattagcaactctggtggtggctttcatggaagggtac
tgctggagcagaacgagcgagaggcaggtgctgaggatcaggcacaagtatttggaggcg
attctgagacaagaggttgccttctttgattcgcaggaggcaaccaccgcagaggtcatt
aacagcatctccaaggacactgctctaattcaagaagtgctcagcgagaaggtgcctctg
ttcatcatgcactcttccaccttcatctccggcctggccttctcgacgtacttctcgtgg
aggctctcgttggtcgccctcccgctcgtcggcgtcctcgttatcccggggctcatctac
ggcaagtacctggtctacctgtcgcgcgagtcccgcgaggcgtatggcaaagccaacgcc
atcgtggagcaagcgttgagctcgatcaagaccatctactcgttcacggccgagaagagc
atcgcggagaggtactccgtcatcttggagaagacggtgaggctggggatcaagcagggg
atcgccaagggactcgcggtgggaagcaccgggttgtccttcgccatctgggcgttcctc
gcctggtacggcagcgggctggtgatgtaccacggcgagagcggcggaaggatttacgcc
gccggaatttccttcgttttgggcggattatctcttggcatggcgctgccggaggtgaag
cacttcgcggaggcgtcggtggcggcgaagaggatactcgagaggatcaacaggcggccg
cgaatcgatgcggaggatcccaaggggttgaagatggaggagatgcacggcgaggtggcg
ttcgaatcggtccagttcgcgtacccttcgcggccggaggtgcccgtgctgagggacttc
agcctccgggtcccggcggggcagacggtggcgctggtgggcaccagcgggagcgggaag
tcgacggccgttgcgctgctgcagcggttctacgacgcggatgctggggcggtgaggatc
gacggcgtggacatcaggaagctgcagctgaagtggatcagggcaaagatggggctggtg
agccaggaacatgctctgttcgggacgtcgatcagggagaatattttggtggggaagcca
ggcgccgccgccggcgagatattcgcggcggccatgacagcgaatgcccacaacttcatc
aggcaattgccggagggatatgagaccaagatcggggagagaggcgcgcttctgtccggc
ggccagaagcagagaatcgccatcgccagagcaatcatcaagaaccctgcgattcttctt
ctcgacgaagccacgagcgcgctcgactctgaatcggaaaagctggtgcagaatgccctc
gatcaagcttccatgggaagaacaacactggtggtggctcacaaattgtcgacgattaag
aacgccgaccaaatcgcggtggtagattgcggaaggatcgtggagatcggcacccacgac
gagctcatcgccgagaaaaacagccactactcgcgcctggtgaagctacagaggatcccg
agcaatctcgatccggagccggaatccttccgcccttcctccgtcgccaggagcagcgcg
agccgcctcagcctcaccaaagccagccccgccttctccgaggaccaatccaccgcctcc
gtcgccgcctcccctgcgccctccttctctcggctcatcgccatgaacgcgccggagtgg
aagcaggctgtggtcggcagcctctccgccgtcgtttttggatccgttcaacccatctac
gccttctcgatcggcggcatgatcgccgctttcttcctccaagaccacgacgagatgaaa
gccgccatccgccgctttgccctaattttctccgccctctctctggtttcgatcatcgtc
aatctgttacagcactacaacttcgcttacatgggcgagcgcttgacgaagcgcattcgg
atacgggcgctggaaaagatcctaactttcgaggtggcgtggttcgacgacgacgagcac
tccagcggcgcgctgtgctcgcggctgagccacgaggcggcgctggtgaaaacgctggtc
gccgatcgcctgtccctgctgctccagaccgcctccggcgtggtcgtcgccatgaccatg
gggttggccatcgcctggaagctggctctggtcatgatcgcgatccagccctcgacgatg
atctgccactacgccaagaaggtggtgctgtctcgggtgtcggtggcgctggcgaaggcg
cagcacagcagcacgcagatcgccatcgaggcagtgtacaaccaccggatggtgacttcc
ttcgggtgcgccgacaaggtgctggagctcttcaaggaggcgcaggaggagccggtgagg
gcgtcgaggaagaaggcgtgggtggcgggcctggctaccgggagtgcgccgtgcctgtcg
tttctgtcatgggcgttggacttctggtacggagggagattggcgcagtccggcgagatc
tcagccggagacgtattcaagaccttcttcatcttggtgagcacgggaaaggtaatcgcc
gaggccagcagtatgacttccgacctggccaagggcgccaccgccgtggcgtcggtcttc
gaggtgttggaccgtcagtccttcatatcaacttcttcttccccttcttccaacggcgag
accaagcagatacaaggaaagatcgagatccggaaggtggacttcacctacccgacgcgg
ccgctctgcccggtgctgcgtgacttcagcttggaggtgaaggccgggacgagcgtcggc
ttcgtcggccgcagcggctgcggcaagtccaccgtcgtcagcctcatcctgcgtttctac
gacgtcgaccgcggcgtcgtccgcatcgacagcaccgacgtccgggagctcgacctcatc
tggttccgcggcttcactgcgctcgtcagccaagacccggtcatcttctccggcaccgtc
cgcgacaacatcgccctgggcaaacccagcgccaccgaggatgagatcgtcgaggccgca
cgagccgccaacgcccacaacttcatctcatcgctgaaggacggatacggcaccaactgc
ggggagaggggagcgcagctatcgggagggcagaagcagaggatcgccatcgcgagggcg
atcgtgaggaacccgaggattctgctgctggacgaggcgactagcgcgctcgacgtggag
tcggagagggcggtgcaggaggcgctggaccggatcatggtgggcaggacgacggtggtg
gtggcgcaccgcctcaacaccatcaagaaggtcgactccatcgccttcctcggcgaaggg
aaggtggtggagcggggtagctacgcgcaactgatggccaagaagggagccttcttcgac
ctcgccgctccgtga
DBGET
integrated database retrieval system
