KEGG   Zingiber officinale (ginger): 122049637
Entry
122049637         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122049637
   04120 Ubiquitin mediated proteolysis
    122049637
  09126 Chromosome
   03083 Polycomb repressive complex
    122049637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122049637
   04121 Ubiquitin system [BR:zof04121]
    122049637
   03036 Chromosome and associated proteins [BR:zof03036]
    122049637
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122049637
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     122049637
   Cul7 complex
     122049637
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122049637
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122049637
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF6324
Other DBs
NCBI-GeneID: 122049637
NCBI-ProteinID: XP_042466929
LinkDB
Position
2B:145166306..145168102
AA seq 159 aa
MDTDKKIILLSSEGDAFEVDTAVAMASQTIKHMIEDRCTEGGIPLPNVTSRILAKVLEYC
KMHVNDYSVLSDDVTKLVPEELTAWDAEFVSVDQETLFSIILAANYLHIQRLLDLACQSV
ANMIRGQTTEEIRKIFNIKNDFDPEEEEEIRKENEWAFM
NT seq 480 nt   +upstreamnt  +downstreamnt
atggacacggacaagaagatcatcctgttgagctccgagggcgacgcgtttgaggtggac
accgcggtggccatggcgtcgcagaccatcaagcacatgatcgaggacagatgcacagag
ggcgggatccccctccccaacgtcacctccaggatccttgccaaggtccttgagtactgc
aagatgcacgtcaatgactactccgtgctttccgacgacgtcaccaagctcgtccccgaa
gaactcactgcttgggatgccgaattcgttagcgtcgaccaggaaaccctattcagtatt
atcttggctgcaaactacttgcacatccagaggctgctggatctggcatgccaatctgtg
gctaacatgatcaggggccagactactgaagagatccgcaagatattcaacatcaagaac
gacttcgacccggaggaagaggaagagattcgcaaggagaatgagtgggccttcatgtaa

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