Zingiber officinale (ginger): 122050607
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Entry
122050607 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase WAV3-like
Organism
zof
Zingiber officinale (ginger)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
Vwaint
VWA_3
VWA_2
VWA_CoxE
zf-RING_11
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-ANAPC11
zf-UDP
zf-RING_4
zf-RING_5
zf-HC5HC2H
Phage_holin_7_1
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
122050607
NCBI-ProteinID:
XP_042467436
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Position
1B:10921267..10930905
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AA seq
725 aa
AA seq
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MGSAWRNAKRTLGLNLCVHVPRPMGDEEGDMVRRGASAEGRRASVAAATASSSPQSSMNA
SQIISRTTSTPTPSSDGLRIPKSGSRSSKRTCAICLGSMKTGHGHALFTAECSHMFHFHC
ITSNVNHGNLVCPLCKATWKEIPFQGPLSSDHPRGRTRVNPVNWPQDNHMTIVRQFPRVD
STNRQRQRFPSFFRGSEPDVFNDDEPLNLQSEATEDSRQGYLNTVEIKTYPEFSTIPQSA
SLVDFSVLVHLKAPRSTSQAISYQNLVSSSTMPQHSRVPVDLVTVLDVSGSMAGTKLALL
KRAMCFLIQNLGPSDRLSVVAFASTAHRLFHLRRMSDSGRQQALQAVNSLVAIGGTNIAD
GLRKGVKVIEERKAKNPVCSIILLSDGQDTYTFSSNAGATFGGAHGRSQLNYNSLVPSSI
LNGTAIPVHTFGFGNDHDSTAMHAIAETSGGTFSFIESEIVIQDAFAQCIGGILSVVLQE
MRLGIECVHPGVHLAPIKSGSYRNQLFDNARAGFIYVGDLYADEERDFLVSINVPSAGED
TVLLKITCSYTDPLSKGIVHLEAQEVRVQRPKVVLSQTPSIEVDREKNRIQAAEAMSNAR
AAAERGALSTAVSILEERRRILSESLAAKLKEPLCMSLDAELKEMQERMASRQRYEASGR
AYVLSGLSSHSWQRATARGDSTNTTSLVHSYQTPSMVDMLHRSQTMSPPSRRRVPPVKAT
RSFAS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcctggagaaacgcgaagaggacgctgggtttgaacctctgcgttcacgtc
cccagaccaatgggcgacgaggagggcgacatggttcgccgcggtgcgtccgccgagggg
cggagggcctccgtcgccgcggcgactgcgtcatcttcgccgcagtcgtcgatgaacgcg
tcgcagatcatatcgcggacgacgtcgacgcctacgccatcctccgacggccttcgaata
cctaaatccggcagcagatcgtccaagagaacatgtgctatttgtcttggatccatgaaa
actgggcatggtcatgcgctcttcacagccgagtgctcccacatgtttcactttcattgc
attacctcaaacgtcaaccatggaaaccttgtatgccctctttgcaaagccacttggaag
gaaattccatttcaaggtccattatcttctgaccaccctcgtggaagaaccagagtaaac
ccagtcaactggcctcaagataatcatatgaccattgtgcggcagtttcctcgtgtagat
tctacaaataggcagcgccagcggtttccttccttctttcgtggttctgaaccggacgtc
tttaatgatgatgagcctctaaatttgcaatctgaagccactgaagattcccgccaaggt
taccttaacacagtggaaataaagacatatcccgagttttctacgattccacagtcagct
tctttagtggatttttctgtcctggtccatttaaaggctcctcgttcaacctcacaagcg
atttcatatcagaatcttgtatcaagttctacaatgccacaacattctcgtgttcctgtt
gacctggtcactgtgctagatgtcagtggaagcatggcgggcacaaagttggcgcttctc
aagcgtgccatgtgtttcttgattcaaaaccttgggccatctgatcgtctttccgttgtt
gccttcgcatcaactgctcacagactcttccatttgcgtcgaatgtccgactccggccgg
caacaagctttgcaggctgtcaattctctggtggccattggtgggacaaacatcgcagat
gggctcaggaagggggtcaaagtgatcgaggagcggaaagcaaagaatccagtgtgcagc
attatacttctttccgatggtcaggacacttatactttttcctcaaatgctggagcaact
tttggtggagctcatgggcgctcacaattgaactacaattcacttgtgccatcctctatt
cttaatggaacggcaataccagtgcatacctttggttttgggaatgaccatgattctacc
gccatgcatgccattgcagaaacctctggcgggacattttcctttatagaatcagaaata
gtaattcaggatgcttttgctcaatgcattggtgggattctgagtgtggtactgcaagag
atgcgcttggggatcgagtgcgtgcatcctggagttcatctagctcccatcaaatcagga
agctataggaaccagttgttcgacaacgctcgtgccggatttatttatgtgggcgacctc
tatgctgatgaagagagggactttctagtttctataaatgtcccatctgccggagaggat
actgtattgcttaagataacctgtagctacacagacccactttcaaaaggcattgttcat
ctggaggctcaagaagtgagagttcagagacccaaagttgtcctgtctcagactccctca
atcgaggttgaccgcgagaagaatcggatccaggctgcagaagcaatgtcaaatgccagg
gctgccgccgagcgaggtgccctgtctactgcagtttcaatactcgaagaacgtcgaaga
atactgtctgagtcactggcagcgaagttgaaggaaccactgtgcatgtcactggatgcc
gaactgaaggagatgcaagagaggatggcaagccggcagagatacgaggcctcgggccgt
gcctatgtgctctcggggctgagctcgcattcatggcaaagagcaactgcacgcggtgac
tccaccaatactaccagtcttgtccattcatatcagacaccgtcgatggtcgacatgttg
catcgttcgcaaacaatgagccctccatctcggcgtcgtgtgccgcccgtcaaggctaca
aggtccttcgcttcttag
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