Zingiber officinale (ginger): 122051039
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Entry
122051039 CDS
T08725
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122051039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122051039
03036 Chromosome and associated proteins [BR:
zof03036
]
122051039
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19-related factors
122051039
Complex C
122051039
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122051039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT
TPR_14
Suf
TPR_19
TPR_16
TnsD
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
122051039
NCBI-ProteinID:
XP_042467885
LinkDB
All DBs
Position
3A:3029466..3036088
Genome browser
AA seq
367 aa
AA seq
DB search
MSPASHPLLTLGLLTRRDTEVKLPRSTRVKNKTAAPIQITAEQILREARQRQENHRPPKQ
KITDSDELADYRLRKRKEFEDVIRRARRNTGTWVKYASWEESQGDLARARSIWERLLDVD
YRNPTLWLKYAEMEMRHRFINHARNVWDRAVALLPRVDQLWYKYIHMVEILGDVAAARQI
FERWMDWKPDTQGWLSYIKFELRYDEVDRARAIYERLVVCHPRPSYFIKYAKFEAKRREI
ARARAVYERAIDLNLSEDDVEAEQLFVAFAGFEMWCKETERARCIYRYALDHVPKGRAKD
LYHEYDAFEKQYGDTAAMEDAIIVRKRKLKSDDDEEEEEQVRRKPLNYDSLLEAAYIWKK
QKLAADI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggcttcccatccgctcctaaccctaggcctcctcacgagacgcgacaccgag
gtcaagcttccgcgctctacccgcgtgaagaacaagacggcagcacccatccagattacc
gccgagcagatcctgcgcgaggcccgccagaggcaagaaaatcaccggccgccgaagcag
aaaatcaccgactccgacgaactagcggattaccggctccgcaagagaaaagaattcgaa
gatgtcatccggcgcgctcgccggaacaccggcacctgggttaagtatgcctcctgggag
gagtcccagggggacttggctcgcgctcgatccatctgggagcgcctcctcgacgtcgac
tatcgcaaccctaccttatggctcaaatatgccgaaatggagatgcgtcaccgctttatt
aatcacgcgcggaatgtctgggaccgcgccgtcgccctcctcccccgcgtcgaccaactt
tggtacaagtacatacacatggtagagattctcggcgatgttgcagccgcacgccagata
ttcgaacgctggatggactggaagcccgacactcagggctggctttcctacatcaagttt
gagcttcggtacgacgaggtcgatcgtgcacgtgctatctacgaacggttggttgtttgc
caccctcgtccttcctatttcatcaagtacgccaagttcgaggccaagcgccgcgaaatt
gctcgtgcccgtgcggtgtatgagcgagccatcgatcttaatctttccgaagacgacgtg
gaagcagagcagctgttcgttgcctttgcaggcttcgagatgtggtgcaaggagacggaa
cgagcgcgttgcatataccgatacgccctggaccacgtccccaaggggagggccaaagat
ttgtaccacgagtacgatgctttcgagaagcagtatggagacacggctgctatggaagat
gctataattgtcagaaaaaggaaattaaagtctgatgatgatgaggaggaggaggagcag
gtgaggaggaagcctttgaattatgactcactactcgaagcggcatacatatggaaaaag
cagaaactcgccgcagatatatga
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