Zingiber officinale (ginger): 122051412
Help
Entry
122051412 CDS
T08725
Name
(RefSeq) (-)-kolavenyl diphosphate synthase TPS28, chloroplastic-like
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00904
Diterpenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
122051412
Enzymes [BR:
zof01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
122051412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Suppressor_P21
SQHop_cyclase_C
Terpene_synth_C
HGWP
Motif
Other DBs
NCBI-GeneID:
122051412
NCBI-ProteinID:
XP_042468485
LinkDB
All DBs
Position
3A:22511225..22515639
Genome browser
AA seq
702 aa
AA seq
DB search
MVQEVKAILRSMEDGEISVSAYDTAWVALARDPERTDRPLFPKSLRWIANNQLGDGSWGD
AAAFSAHDRLINTLACAVVLASWNLHPDKCLRGVEYVRENMWRLEEEAAEHMPIGFEVAF
PSLMDLAKELGLEIPYSHPYLQSISAMRDLKLKRIPKQVLHEVPTTLLHSMEGMAGLDWE
KLLRLQCRDGSFLFSPSSTAYALMQTGDGKCLKYLERIVRRFDGGVPNVYPVDLFEHLWV
VDRLQRLGIARYFKPEIKDCLDYVHRYWTEDGICWAKDSRVFDIDDTSMGFRLLRLHGYP
VSPDVLQQFEKDGEFVCFPGQSNQAVTGMYNLNRAAQVAFPGEEILKRAKSFSYAFLREK
QAAHQLLDKWIITKDLPGEVEYALDFPWYASLPRVEARLYLEQYGGGSDIWIGKTLYRMP
LVNNDMYLELAKLDFNHCQAHHQLEWLYLQKWYEEAGLGRHGVSRRTLLEDFFLAASCIF
EPERKTERLGWVRTLVFSKAISAYFGRDSCTETMRQTLILNFLNADDCCSNEHGTNRAGK
SGNGEWLAELLQQLVDGLVVLGAESDRKRMRNYLLEAWIVWLSTWKSEEQGTGVLLVRTI
EACGGRFDSILAQPHCDILSSICDRLLQQKLDPKNTHKETLEEKMRELAQCVLQSTSEEQ
GLDLHQTKQTFLLVAKSFYYVAHCSEDVLNDHIAKVLFQPAD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaagaggtgaaggcgattctgcggtcgatggaggacggggagatcagcgtctcg
gcgtacgacacggcgtgggtggcgctggccagggacccggagaggaccgaccggccactg
tttccgaagagcctccggtggatcgccaacaaccagctcggcgacggttcttggggggac
gccgccgccttctccgcccacgaccggttgatcaacacgttggcctgcgccgtcgtgctc
gcctcctggaatctccaccccgacaagtgcctcagaggggtggagtacgtgagggagaac
atgtggaggctggaggaggaggcggcggagcacatgcccattggcttcgaggtggcgttc
ccttcgctgatggacctggccaaggagctggggctggagattccctactcgcacccttat
ttgcaaagcataagcgccatgagagaccttaaattgaagaggattccgaagcaagtgctg
cacgaggtgccgaccacgctgctgcatagcatggaaggaatggctggcttggactgggag
aagcttcttcgactacagtgccgagacggctcctttctcttttcgccttcctccaccgcc
tacgcgctgatgcagacgggcgacggcaaatgcctcaaatatctcgagcgaatcgtccgt
agatttgatggaggagtgccgaacgtgtaccctgtcgacctcttcgagcacctgtgggtg
gtggatcgcctgcaacgcctcggcatcgcccgctacttcaagccggagatcaaggactgc
ctcgattacgtgcacagatactggacggaggacggcatttgttgggccaaggactcgcgg
gttttcgacatcgacgacacgtcgatggggttccgcctgctgcggttgcacggttaccct
gtctcccccgatgtgctgcagcaattcgagaaggacggggaattcgtgtgcttcccaggg
cagtcgaaccaagcggtgacggggatgtacaacctgaaccgggcggcgcaagtggccttc
cccggggaagagatactgaagcgagctaagagcttctcctatgccttcttgcgagagaaa
caagctgcacaccagctgctcgacaaatggatcatcaccaaggatttgcccggggaggtg
gagtatgctctggatttcccctggtacgcgagcctgcctcgcgtcgaggcaagactctac
ttggagcagtatggagggggaagtgatatttggattggcaagactctctacaggatgcct
ctggtgaacaatgatatgtatttggagttggctaaattggactttaaccattgccaagct
caccatcagctggagtggctctatcttcaaaagtggtacgaggaggcaggccttggaagg
catggtgtgagcagaagaaccctgttggaggacttcttcttagcagcctcttgcatattc
gaacccgaacgcaagactgagaggttgggttgggttcgaaccctggttttctcgaaggcc
atttcagcctactttggcagggactcatgcactgaaactatgagacaaacactgatactg
aacttcctcaatgctgatgactgctgcagcaatgagcatggcaccaacagggcaggcaag
agtgggaacggagagtggctggccgagttgctccagcaactcgtcgatggccttgtggta
ttgggtgcggaatctgatcgaaagcgaatgcgcaactacttactcgaagcctggattgtg
tggttatcgacatggaagagtgaagagcaaggaaccggggtgttactagtgaggaccatc
gaggcttgtggagggcgtttcgactcgattctagctcaaccacactgtgacatcttatcc
tccatctgtgatcgacttttgcaacaaaagctcgaccccaagaacacgcacaaggagaca
ctagaggagaagatgcgagagctagctcagtgtgtgctccagagtacttcagaggaacaa
gggctcgacttgcaccaaaccaagcagacatttcttcttgtggcaaagagcttctactat
gttgctcactgctcagaggatgttctcaacgatcacatcgccaaggtcctcttccagcct
gcggattaa
DBGET
integrated database retrieval system
