Zingiber officinale (ginger): 122053164
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Entry
122053164 CDS
T08725
Name
(RefSeq) zinc finger CCCH domain-containing protein 19-like
Organism
zof
Zingiber officinale (ginger)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
GYF
SWIB
zf-HC5HC2H
Torus
zf-CCCH_2
zf_CCCH_4
zf-HC5HC2H_2
GYF_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
122053164
NCBI-ProteinID:
XP_042471018
LinkDB
All DBs
Position
3A:complement(161813808..161828115)
Genome browser
AA seq
1978 aa
AA seq
DB search
MDEEVGEGALALVEPHPSDDEHTHPEAVEVGLRQCDQAEGGVEAGYSPVSKSSSHALPLS
GFDAGAPVLIEAPEALADASPACDGGAKDGRVEMIDVDGMSHPQSEQASDCVTELSVPQG
SLASLSDEGAEKAIVFEVDSPNTAVDDADILQEEGKTENNHILQSHKGKNCEHEEIFMSQ
GPPDASNCDLDGSNSSIPASEAATIIISSHHTAPVVSSDMDVSNMEVDAATSSQHCKDSV
QGEVIHSQGSSSVLSFDSDVQKFAAYVSDNVTTATGNADVVEEVVLKTDMDRLPVSELLQ
GKEEDSIKEASSVPQSSYAVPSSGFDGDVLNFDGTEIVNVPTTTVGDGAVHLATVKMDVD
TAPIVAGEQVACEEADVLMCVPSSSISDSVLQKVASSVPITAAQPGDNGAMKVDMTFTDM
DKLDNVTLPICEQMEDVVVADISLSKDSSSEFPFDFDSGLQNITTLEPDMTTISHDSADV
VGDEATQMDADADADADADADADADADADADADDAPAVARRGGRRKRGRPSRTQVVKISS
KQKEDEEVCFICFDGGDLVVCDRRGCPKVYHPSCVNRDEAFFRAKGRWTCGWHICSSCEK
SARYMCFTCTYSLCKGCMKNAGFICVRENKGFCEACMSTVMLIETKENGHGQMVTIDFDD
KSSFEYLFKDYYLTLKAKLSLTLDELMSARNPIKRSDVAILNDDSGKLLNPKEQQVASSD
SSSDHKERTSRRKIRKRTNKFIKEEGSVKLDNAGSVKVDNVGTSASRNSEWATDELLEFV
AHMRNGDTSALSQFDVQALLLDYIKKHNLRDRRRKSQIVCDSRLGNLFGKERVGHFEMLK
LLESHFIIKEVSMLDSEDKQGGVVDPDPDPTDAKANSDPSTKLTLDKRRKARKKVEDKEL
LNNLDDYAAIDVHNISLMYLRRNLMENLIDDDEFEEKIIGTFVRIRISGLGQRQDMYRLV
QVVGSGKATEPYKSGKRTTDVTLEILNLNRKEIITIDIISNQEFTEEECKRLRQSIKCGF
IGRLTVGEVLENARSLQHVRVNDWLESEKSRLGHLRDRASEKGRRKELRECVEKLQLLNT
PEERDRRLNEVPDIHTDPRMDPDFESAEEEEPDVGKHDFYDKSRGSSFTRNGRDVKSPGK
GGSTENWNSFRKNSNSWESNRSTQIQVGSLSDSFSGRCADATDFSSNKSSDIVRPVNSEA
PRNHALGSGSDGSLYNEKHLSTIQLTEGSLGSQKASFPVGVVTKSNPSESEKIWHYKDPS
EKIQGPFSMIQLRKWSTTGYFPPNLKIWRTSDKPEDSILLSDALAGKFEKDLPEWEPPSK
NIDQSVDVSSTPFNAEGNSESIKRGSNVSNLPDSTQNLTLSSWSSTKMDVSAGASSNDAN
IKIELGQRQTKAIESQSSSQYYVNSHLNRSSTSNQLSSTQISLNESYQLREDSSNVLTLT
SQPSSEGWSNVKGFANKHMPTDASDHDKASGWVTTTRGSEETVSLRNTTNSSTELGTGSA
QFVHDQTVKDGGKSLPVASAPAPEMKLHQIQQGAAANETNFSEYNQVTSSQLSDKNRILL
SHNQNDSGKHLLAMQMQGRSSDGSGPTTDSVARAQIVASQKSEAPDLSTHSIDTARKLFV
QADASESSLSQRSQASVAPNPERMNSANFEVPIYMNNTNNQMPSSNMTPYGWSPVPKSTA
ATVDNTQLLSSNSSNPPSSQFGSNNIVPSQPTQLGFVNGSNIQNTAFPVASQNPTTNPVS
TQATGSWTPVPQGNMNAGWGMVAQNNMSMPWRQTTQTVADFNMGLGVQNQVNPMVNPGWV
APPQGNTNMSSGWAAPALGNANQTPGWAGQLQGNLAVHPVWAMFMPGQPNPSPGWVAPVQ
PNTNHILETSAQTMNMNPAWGPGQGNINPGQGNINPSTNQLVGNPHSFGSQPPQTGDLQS
GQGDNSRANDSRQPNPRSSWNRTQSGGSLAPPRGNAGICRYYENGHCRKGASCNYFHS
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagtaggagagggagctttggccttggtcgagccccatccctcggacgat
gagcacacgcacccggaggccgtcgaggtcggcctgagacaatgcgaccaggcggagggc
ggagtcgaagcgggctattcgcccgtatctaagagttcctcccacgcgttgcccctttcc
ggatttgatgcgggtgcgccggttcttatcgaggcgccggaggccctagccgatgctagt
cctgcttgtgatggtggcgccaaggatgggcgggtggagatgatcgatgtggatggcatg
tcacatcctcagagtgagcaggcatctgattgtgtgacagagctatcagtgccccagggc
tcccttgcttccctatctgacgaaggagctgagaaagctatcgtctttgaggttgattct
cccaacaccgctgtggatgatgctgatatccttcaagaggagggaaagacagagaacaat
catattctgcaatctcataaagggaagaactgcgagcatgaagaaatttttatgtctcag
ggcccacctgatgcgtccaactgtgatcttgatggaagtaattcaagcatccccgcctca
gaggctgccacgatcatcatttccagccatcacaccgctcctgttgtttcgtcagatatg
gatgtgtcaaacatggaggtggatgcagctacgagttctcagcattgcaaggacagtgtc
cagggagaagtaattcattctcaaggatcatcttctgttctttccttcgattctgatgtc
cagaaatttgcagcctatgtaagtgataatgtcactactgccacagggaatgctgatgtt
gtggaagaggtagttttaaaaactgatatggataggttgccagtttctgaattgctacaa
gggaaggaggaggacagtattaaagaggcgtcttctgtgcctcagagctcttatgccgtg
ccttcctctggttttgatggtgatgttttgaactttgatggcactgagattgttaatgtt
cccaccactacagttggtgatggtgctgttcacttagcaacggtgaagatggatgttgat
actgcaccaattgtcgcaggcgagcaggttgcttgtgaagaagctgatgttttgatgtgt
gtaccatcatcctccattagtgatagtgtacttcagaaagtagcgtcatctgtgcctatc
actgctgctcaaccaggtgataatggtgctatgaaagtggatatgacattcacagatatg
gataaactggacaatgtgacacttcccatatgtgaacagatggaggatgttgtggtggca
gatatttcattgtccaaagattcatcatctgagtttccctttgattttgatagtggactt
cagaacattaccacacttgagcctgatatgaccaccatttcacatgacagtgctgatgtt
gtgggtgatgaagcaacacagatggatgcagatgctgatgcagatgcagatgcagatgca
gatgctgatgcagatgctgatgctgatgctgatgctgacgatgcaccagctgttgcccga
agaggtggacgaaggaagaggggtcgaccatcaaggactcaagttgttaaaatttcctca
aagcagaaagaagatgaagaggtgtgctttatttgctttgatggaggtgatcttgtagtt
tgcgatcgtaggggttgcccaaaggtgtaccatccttcgtgtgtcaatcgagatgaggct
tttttccgtgcaaaaggtcgttggacttgtggttggcatatatgcagtagctgtgagaaa
agtgctcgctacatgtgctttacctgcacatactctttgtgtaaagggtgtatgaagaac
gctgggtttatttgcgttagagaaaataaagggttctgtgaagcttgcatgagcactgtg
atgctgatagagacaaaggaaaacgggcatggacaaatggtcacaattgattttgatgat
aaaagtagttttgaatatttgttcaaggactactatttgactctgaaagcaaagttgtca
ttgacactcgatgagttaatgagtgctagaaatccaatcaagagatctgatgttgccata
ctaaatgatgattctggtaaattgcttaatcctaaagaacagcaggtggcatcttcagac
agctcttcagaccataaagaaagaacttctaggaggaaaataaggaaaagaactaacaaa
tttatcaaggaggaagggtcagtaaaattagataatgcaggatcagtaaaggtagataat
gttggtacatctgcctccaggaattctgaatgggctacagatgaacttttggagtttgta
gcacatatgagaaatggtgatacatctgctttatcccagtttgatgttcaggctcttttg
cttgactacataaaaaaacataatcttcgtgatcgccgtcgaaaaagtcagattgtttgt
gattcaagacttggaaatctttttgggaaggagcgtgtggggcactttgaaatgctaaaa
cttctcgagtcacacttcatcataaaagaggtatcaatgctagatagcgaagacaagcaa
ggaggcgtagtagatcccgatcctgacccgacggatgctaaagcaaatagtgatccatcc
acaaagttaactcttgataagagacgcaaggctcggaaaaaggtggaggacaaggaactt
ctaaacaaccttgatgattatgcagcaatagatgttcacaacattagcttaatgtatctg
cgtcgcaatttaatggagaacttgattgatgatgatgaatttgaggagaaaataattgga
acctttgtaagaataagaatttctgggttgggacaacggcaagatatgtaccggttggta
caagttgtcggttcgggcaaagctacagaaccgtacaaaagtggaaagaggacaactgat
gtaactcttgagatactaaatttaaacaggaaggagattattacgattgatatcatctcg
aatcaggagttcaccgaagaggaatgcaaacgtttaagacagagcattaaatgtgggttt
attgggcgactaacagtgggagaagttctggagaatgcaaggtctctccaacatgtaaga
gtaaatgattggttggaaagtgagaaatcaaggcttggtcatcttcgtgatcgtgctagt
gaaaaaggtcgtcgaaaagagcttagagaatgtgtggaaaagttgcaactgttgaataca
cctgaagagcgtgaccgtaggctaaatgaggtccctgatatacacaccgacccacgtatg
gatccagactttgagtctgcagaggaagaagagccagatgtggggaaacatgatttctat
gacaagtcaagaggatcttccttcactaggaatgggagggatgtaaagtctcctggaaaa
ggaggttcaactgaaaactggaatagtttccggaaaaactcgaactcttgggagtcaaac
agaagtacacaaatccaagttgggtctttgtcagattccttttctgggagatgcgctgat
gcaactgatttttcttcgaacaagtctagtgacatagtccgaccagttaattctgaggct
ccaagaaaccatgcacttggaagtgggtcggatggcagtctgtacaatgagaaacatctt
tcaacaatacagttaactgagggttcacttggttctcaaaaagcatctttcccagttgga
gttgtgacaaaatcaaacccaagtgaatcagaaaagatttggcactataaagatccctct
gaaaaaatccaaggaccattttcaatgattcaattacgtaagtggagtacgactggttac
tttcctcctaatttgaagatttggagaacttctgataagccagaggattctatattgttg
agtgatgcactggctgggaaatttgagaaagacttaccggagtgggaacctccctctaag
aacatagaccagtcagttgatgtttcctctactccatttaatgcggaaggaaattcagaa
agcattaagagaggaagtaatgtttctaatttgcctgatagcacacaaaatttgacactt
tcttcctggtcatctacgaaaatggatgtctctgctggggcatcatcaaatgatgccaat
attaagattgaacttgggcaaagacaaaccaaggcaattgagtcacagtctagtagtcag
tattatgtaaattctcatctcaataggagctctacaagcaatcaattatctagtacacaa
atctcactaaatgagtcgtatcagttgagagaggattcttccaatgtgcttactctgact
tcacaaccaagtagcgaaggctggtcgaatgtcaaaggctttgcaaacaaacatatgcca
actgatgcttctgaccatgacaaggcttcaggctgggttaccactacaagggggtcagaa
gaaacagtgtctttaagaaataccacaaattcatcaacagagttgggcacgggctctgca
cagtttgtgcatgatcaaactgttaaagatggtggaaaatctcttcctgttgcatctgca
ccagcacctgaaatgaagttgcaccagatccagcaaggagcagcagcaaatgagacaaat
ttttctgaatataatcaagtaacctcctctcagttgtctgacaagaatcgtattcttctc
tcacacaatcaaaatgactctggtaaacatttgctggcaatgcaaatgcaaggtagatca
tctgatggtagtggaccgactactgattcagttgctcgtgcccaaattgtggcttcccaa
aagtctgaagcacctgatcttagtacacactcaattgatacagctagaaaattatttgtt
caagcagatgcttcagaatctagcttaagtcagagatcacaagcatcagtagctccaaat
cctgagcgtatgaattccgcaaactttgaagttccaatatatatgaacaacactaataat
caaatgccatcgtcaaacatgacaccttatggttggagccctgttccaaagtctactgca
gctaccgttgataatactcaattactctcttctaacagttctaatccaccatcttctcag
tttggatctaacaatattgtaccatcacaaccaacgcaattgggttttgttaatggatca
aatatccagaacacagcttttccagtggcttcacaaaacccaaccacaaatccagtttcc
acacaagcaactggaagttggacaccagtgcctcagggaaacatgaatgctggctgggga
atggtagcccaaaacaatatgagcatgccctggaggcagaccacacaaacagttgcagat
tttaacatgggtttgggagttcaaaatcaggtaaatccaatggtgaaccctggttgggta
gctcctccacaaggaaacacaaatatgagctcagggtgggcggccccagcactgggtaat
gcaaatcaaactcctggatgggcaggtcaattgcagggaaatttagccgtgcatcctgtt
tgggctatgtttatgccagggcagccaaaccctagtcctggctgggtagctcctgtacag
ccaaacacaaaccacattttggaaacatctgcacaaacaatgaacatgaatcctgcttgg
ggaccagggcaagggaatattaacccggggcaaggaaatattaacccatctacgaatcaa
ctagttggtaatcctcatagctttggtagtcaaccaccacagactggagacctgcaatca
ggccaaggcgataactcaagggccaacgactcaagacaaccaaatccaaggtcatcatgg
aacaggacgcaatctggaggatcattagctcccccgagaggaaacgcaggcatatgcagg
tactatgagaacgggcactgcaggaagggtgcatcatgtaactatttccattcatga
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