Zingiber officinale (ginger): 122055064
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Entry
122055064 CDS
T08725
Name
(RefSeq) 4-coumarate--CoA ligase-like 5
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00130
Ubiquinone and other terpenoid-quinone biosynthesis
zof00940
Phenylpropanoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
zof_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
122055064
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
122055064
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
122055064
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122055064
NCBI-ProteinID:
XP_042472396
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Position
3B:100532544..100551067
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AA seq
653 aa
AA seq
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MSSFSCVSVTVVNRPTFSIFSFGCRLHSHRWRQNDPVRKRKGGKLRSLKRSAYFLSCGVL
LFLLFFQSQLTLKSRLPASLSLPSLLVPHFHLLLLLCSPSSLAMADGIPSAAPAVDPRSG
FCSETKTFHSLRRPVPLPPDSVPLNAASFSLSLIPSPLPDQPAIIDAATGASVSYPDLLA
RIRNLASALRSRAGLSRGHVAFLISPPELDIPVLYFALLSIGAIVSPANPLSTPAEIAHQ
IRLSNPFVAFATAATASKLPPHIPTILLDSPRFQSFFDPNPAPLPPVEMQQSDTAAILYS
SGTTGRVKGVALSHRNFVALIASYHTAAKEAEAEEVEAWPRVTLFTVPLFHVFGYFMVLR
EVALGDTVVLMERFDFSAMLAAVERYRVSIMPVSPPLVLAMAKSDAVVGRDLSSLKVLGC
GGAPLGREVSESFAARFPSVEIVQGYGLTESSGGIAGTNDQEENRRYGSTGRIAANTEAK
IVDPTTGESLGPGQRGELWVRGPTIMKGYVGDAEATTSTLDPEGWLKTGDLCYFDHDGFL
YIVDRLKELIKYKAYQVPPAELEQILHSHPKIIDAAVVPYPDEEAGQIPLAFVVRQPGST
ITEEEVIDFVRKQVAPYKKVRRAVFVSSIPKSPAGKILRRELINALSLAKSKL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcttctcttgtgtcagtgtcaccgtggtgaatcgtccaacgttctccatcttc
tcgttcggatgcagactacattctcacagatggcgccaaaatgatcctgtccgaaagcga
aaaggtggaaagctgaggagccttaaaaggtccgcatactttttatcttgcggggtttta
ttatttttattattttttcagtcgcaattaactctgaaatctcgactaccggcgtctctc
tctctcccgagccttctcgttccccacttccacctgctcctgctgctctgctccccctcg
tcgcttgccatggcggatggaattccttctgcggctccggccgtagatccgcggagcggc
ttctgcagcgaaaccaagacattccacagcctccgacgacccgtccccctgccaccagat
tccgtccccttgaatgctgcctccttctccctttccctcatcccctcccccctccccgac
caaccggccataatcgacgccgccaccggagcctccgtctcctacccagacctcctcgcc
cgcatccgaaacctcgcctctgccctccgctctcgcgccggtctctccaggggccacgtc
gccttcctcatctcccctcccgagctcgatatccccgtcctctacttcgccctcctctcc
atcggcgccatagtctccccagccaaccccctcagcactcctgccgagattgcccaccaa
attcgcctttccaaccccttcgtcgcctttgccaccgctgccactgcgtccaagcttccg
ccccatatccctactatcctcctcgactccccgcgattccagtccttcttcgaccccaat
ccggcaccgctgcctccggtggagatgcagcaatcggacaccgcggcgatcctctattcg
tcggggacgacggggcgtgtgaagggcgtagcgctatctcaccgcaacttcgtcgccctg
atcgcatcctaccacaccgcggcgaaagaggcggaggcggaggaggtggaggcgtggccg
cgggtgaccctcttcacggtccctctcttccacgtgttcggatacttcatggtactccgc
gaggtggcgctgggggatacggtcgtgctgatggagcggttcgacttcagcgccatgcta
gcggcggtggagcggtaccgagtgagcatcatgccggtgtcgccgccgctggttctggcg
atggccaagtcggacgctgtggtcggccgagatctctcctccctgaaggttctgggatgc
ggtggcgcgccgcttggtcgggaggtgtcggagagctttgctgctcgcttcccgagcgtc
gagattgtccagggttatggtttgacggagtcatccggtgggattgcgggaacgaacgat
caggaggagaacagaaggtatggttctactgggcggatagcggcgaacacagaggcgaaa
atcgtggaccccaccactggggagtcgctgggacccggtcagagaggagagctttgggtt
cgtgggcccacaatcatgaaaggttatgttggcgatgctgaggcaactacctccacattg
gatcctgaaggttggttaaagacgggtgatctatgctattttgaccatgatggtttcctc
tacattgtagataggttaaaggagttaatcaaatataaagcatatcaggttccgcctgct
gaattggagcaaatacttcattcccacccaaaaattattgatgcagctgttgttccgtat
ccagatgaagaagctggacagatacccttggcatttgtggttagacaacctggaagcact
ataactgaggaagaagttatagattttgtcagaaaacaggttgcaccatataagaaagtc
cgacgggctgtatttgtcagttcaataccaaagtcgccagcagggaagattttgagaagg
gagcttataaatgctctttccttggctaaatctaagctataa
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