Zingiber officinale (ginger): 122055681
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Entry
122055681 CDS
T08725
Name
(RefSeq) (-)-kolavenyl diphosphate synthase TPS28, chloroplastic-like
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00904
Diterpenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
122055681
Enzymes [BR:
zof01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
122055681
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GFIT
Motif
Pfam:
Terpene_synth
HGWP
Terpene_synth_C
Suppressor_P21
Motif
Other DBs
NCBI-GeneID:
122055681
NCBI-ProteinID:
XP_042473157
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Position
3B:complement(6149907..6153913)
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AA seq
703 aa
AA seq
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MVQEVKAILRSMEDGEISVSAYDTAWVALARDPGRTDRPLFPKSLRWIANNQLGDGSWGD
AAVFSAHDRLINTLACAVVLASWNLHPDKCLRGVEYVRENMWRLEEEAAEHMPIGFEVAF
PSLMDLAKELGLEIPYSHPCLQSITAMRDLKLKRIPKQVLHEVPTTLLHSMEGMAGLDWE
KLLRLQCRDGSFLFSPSSTAYALMQTGDGNCLKYLERIVRRFDGGVPNVYPVDLFEHLWV
VDRLQRLGIARYFKPEIKDCLDYVHRYWTEDGICWAKDSRVFDIDDTSMGFRLLRLHGYP
VSPDVLQQFEKDGEFVCFPGQSNQAVTGMYNLNRAAQVAFPGEEILERAKSFSYAFLREK
QAAHQLLDKWIITKDLPGEVEYALDFPWYASLPRVEARLYLEQYGGGSDIWIGKTLYRMP
LVNNDMYLELAKLDFNHCQAHHQLEWLYLQKWYEEAGLGWHGVSRRTLLEDFFLAASCIF
EPERKTERLGWVRTLVFSKAISAYFGRDSCTETMRQALILNFLNADDCCSNEHGTNRAGK
SGNGEWLAELLQQLVDGLVVLGAESDRKRMRNYLLVAWIAWLSTWKNEEQGTGVLLVRTI
EACGGRFDSILAQPHCDILSSICDRLLQQKLDPKSTHKETLEEKMRELAQCVLQSTSSEE
QGLDLHQTKQTFLLVAKSFYYVAHCSEDVLNDHIAKVLFQPAD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaagaggtgaaggcgattctgcggtcgatggaggacggggagatcagcgtctcg
gcgtacgacacggcgtgggtggcgctggcgagggacccggggaggaccgaccggccgctg
tttccgaagagcctccggtggatcgccaacaaccagctcggagacggttcttggggggac
gccgccgtcttctccgcccacgaccggttgatcaacacgttggcctgcgccgtcgtgctc
gcctcctggaatctccaccccgacaagtgcctcagaggggtggagtacgtgagggagaac
atgtggaggctggaggaggaggcggcggagcacatgcccattggcttcgaggtggcgttc
ccttcgctgatggacctggccaaggagctggggctggagattccctactcgcacccttgt
ttgcaaagcataaccgccatgagagaccttaaattgaagaggattccgaaacaagtgctg
cacgaggtgccgaccacgctgctgcatagcatggaaggaatggctggcttggactgggag
aagcttcttcgcctacagtgccgagacggctcctttctcttttcgccttcctccaccgcc
tacgcgctgatgcagacgggcgacggcaactgcctcaagtatctcgagcgaatcgtccgt
agattcgatggaggagtgccgaacgtgtaccctgtcgacctcttcgagcacctgtgggtg
gtggaccgcctgcaacgcctcggcatcgcccgctacttcaagccggagatcaaggactgc
ctcgattacgtgcacagatactggacggaggacggcatttgttgggccaaggactcgcgg
gttttcgacatcgacgacacgtcgatggggttccgcctgctgcggttgcacggttaccct
gtctcccccgatgtgctgcagcaattcgagaaggacggggaattcgtgtgcttcccaggg
cagtcgaaccaagcggtgacggggatgtacaacctgaaccgggcggcgcaagtggccttc
cccggggaagagatactggagcgagctaagagcttctcctatgccttcttgcgagagaaa
caagctgcacaccagctgctcgacaaatggatcatcaccaaggatttgcccggggaggtg
gagtatgctctggatttcccctggtacgcgagcctgcctcgtgtcgaggcaagactctac
ttggagcagtatggaggggggagtgatatttggattggcaagactctctacaggatgcct
ctggtgaacaatgatatgtatttggagttggctaagttggactttaaccattgccaagct
caccatcagctggagtggctctatcttcaaaagtggtacgaggaggcaggccttggatgg
catggtgtgagcagaagaaccctgttggaggacttcttcttagcagcctcttgcatattc
gaacccgaacgcaagactgagaggttgggttgggttcgaaccctggttttctcgaaggcc
atttcagcctactttggcagggactcatgcactgaaactatgagacaagcactgatactg
aacttcctcaatgctgatgactgctgcagcaatgagcatggcaccaacagggcaggcaag
agtgggaacggagagtggctggccgagttgctccagcaactcgtcgatggccttgtggta
ttgggtgcggaatctgatcgaaagcgaatgcgcaactacttactcgtagcctggattgcg
tggttatcgacatggaagaatgaagagcaaggaaccggggtgttactagtgaggaccatc
gaggcttgtggagggcgtttcgactcaattctagctcaaccacactgtgacatcttatcc
tccatctgtgatcgacttttgcaacaaaagctcgaccccaagagcacgcacaaggagaca
ctagaggagaagatgcgagagctagctcagtgtgtgctccagagtacttcttcagaggaa
caagggctcgacttgcaccaaaccaaacagacatttcttcttgtggcaaagagcttctac
tatgttgctcactgctccgaggatgttctcaacgatcacatcgccaaggtcctcttccag
cctgcggattaa
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