Zingiber officinale (ginger): 122055885
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Entry
122055885 CDS
T08725
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122055885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122055885
04147 Exosome [BR:
zof04147
]
122055885
04090 CD molecules [BR:
zof04090
]
122055885
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122055885
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122055885
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122055885
CD molecules [BR:
zof04090
]
Proteins
122055885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
AAA_21
RsgA_GTPase
Zeta_toxin
ABC_ATPase
AAA_15
AAA_25
AAA_30
Motif
Other DBs
NCBI-GeneID:
122055885
NCBI-ProteinID:
XP_042473498
LinkDB
All DBs
Position
3B:10770863..10775052
Genome browser
AA seq
1245 aa
AA seq
DB search
MGRKSGSSTAAAHPSFFSSFSTIFMHADAIDVALMTLGFVGAVGDGVTLPLMLYLTSTIF
NNFGNGPASVSDFAGTINEGALKLIYLACGSFVASFLEGYCWTRTGERQAARMRQRYLRA
VMRQDIEYFDLNAGSGTEVITGVSSDSLVVQDVLSEKVPNFVMNASTFVGSYVTAFVLMW
RLALVAFPAVVLLIIPGLMYGRYLMGLARKIREEYNKAGTVVEQSVSSIRTVYSFVAEER
TIANFSSALDHSVKLGLKQGLAKGMAIGSNAVTFAIWSFMIWYGGRQIMYHGAKGGTVFA
VGACIIIGGLALGSGLSNVKYFSEASSAGERIMEVIQRVPKIDTENEEGDVLDSVSGNVE
FKGVEFAYPSRPESLILRGFNLQVPAGRTVALVGSSGSGKSTVIALLERFYDPLGGGIFL
DGVDIRSLKLKWLRSQMGLVSQEPALFATSIKENIIFGKEDATMEEVVAAAKAANAHNFI
SQLPRGYDTEVGERGVQMSGGQKQRIAIARAVLKSPKILLLDEATSALDTESERVVQEAL
DLASVGRTTIVIAHRLSTIQNADVITVVQDGRVMEMGSHDALIADQDGLYSSLIRLQHAA
RESRSDQVAGAAVTSSHVSSGSISRRRVSAASRTSSSKSLGGDDGDDHVGESSSVKAAKL
PVPSFRRLLRLNSPEWRQAVLGSISAIVFGAIQPLYAFCMGNMIAVFFSSDHDEIKSRTR
TYAFIFLSLTVLSFIVNVGQHYNFGAMGEYLTKRVRMSMLSKILTFEVGWFDEDENATGA
VCARFANDANVVRSLVGDRMALLIQTTSAVVIACTMGLVIAWRLAVVMIAVQPIIIMCFY
ARRVLLKRLSAKAIKSQAASSKLASEAVGNLRTITAFSSQGRILRMFNVAQQGPRRESIR
QSWFAGAGLSLSNGLSICIWALDFWYGGKLVDQGHLGVKALFQTFMILVSTGRVIADAGS
MTTDLAKGADAVASVFAVLDRYTLIEPDDQDAHRIAKLTGEIDICKVDFAYPARPDVVIC
RGFSLYIEAGKSTALVGQSGSGKSTIIGLLERFYDPLKGTVKIDGKDIKSYNLRSLRRHI
GLVGQEPTLFSGTIRENIAYGADGATEAEIEEAARAANAHDFISGLKDGYETYCGDRGTQ
LSGGQKQRVAIARAILKNPAILLLDEATSALDGQSEKLVQEALERMMVGRTSVVVAHRLS
TIRNCDLIAVLDQGVVVEKGTHASLLAKERAYYNLVSLQQGNPGP
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaagagcgggagctctacggcggcggctcacccgtccttcttttcctccttc
tcgaccatcttcatgcacgccgacgcgatcgacgtagcgttgatgaccctcggctttgtc
ggcgccgtcggcgacggcgtgacgctgccgctgatgctttacctgacgagcaccatcttc
aacaacttcggcaatggccctgcgtccgtctccgatttcgccggcaccatcaacgagggc
gcgcttaagttgatctacttggcgtgcggaagcttcgtggcttctttccttgagggatat
tgttggacgaggaccggcgagcgacaagcggcgaggatgcgacagaggtacctgagagcc
gtaatgcgacaggatatcgaatacttcgacctcaacgccggctccggcaccgaggtcatc
accggcgtctccagcgacagccttgtggtacaagatgttctcagcgagaaggtgcctaat
ttcgtaatgaacgcgtcgacattcgtcgggagttacgtgacggcgttcgtgttgatgtgg
aggctggccctggtggcgttcccggcggtggtgctcctcatcatcccgggtctcatgtac
gggcgatacctcatgggcctcgcgcgcaagatccgggaggagtataacaaggccggcacg
gtggtggagcagtccgtctcctccatccgcaccgtctactccttcgtcgcagaggaacgc
accatcgccaatttctcctccgcgctcgaccactcggtcaagctcggcttgaagcaaggc
ctcgccaagggcatggccatcggcagcaacgccgtcaccttcgccatatggtccttcatg
atctggtacggcggccgccaaatcatgtaccatggcgcaaagggaggcacagtcttcgcc
gtcggagcctgcatcatcatcggcggcctggcgttggggtcagggctttccaatgtgaaa
tacttctccgaggcgagctccgccggggagcgcatcatggaggtgatccagcgagtgccg
aaaatcgatacggagaacgaggagggcgacgtcttagattccgtatctggaaatgtggaa
ttcaagggagtggaattcgcgtacccgtctcggccggagagcttgatactgaggggcttc
aatctacaggtgcctgccgggcgaacagttgcgctggtgggcagcagcggttctggaaag
tcgacggtgatcgcgttactggagaggttctacgaccctctcgggggagggatttttctg
gacggagtggacatcaggagtttgaagctgaagtggctgaggtcgcagatgggtttggtg
agccaagagcctgctttgtttgcaacgtccatcaaggagaacatcatttttggaaaggaa
gacgcgactatggaggaggtggtggcggctgccaaggctgccaatgctcacaacttcatc
tctcagcttcctcggggatatgacacagaggtgggagaaagaggggtgcagatgtcggga
ggtcagaagcagcggatagccatcgccagggcagtgctgaagtcgcctaagatccttctc
ctcgacgaggccactagtgcgttggacaccgagtcggagcgagtagtgcaagaagcactc
gacttggcgtccgtcgggcggacgaccatcgtcatcgcccatcgcctttccaccatccaa
aatgccgacgtcatcaccgtcgttcaagatggccgggtcatggagatgggctcccacgac
gccctcatcgccgaccaagacggtctctattcctcactcatccgcttgcagcatgcggca
agagagagcagaagtgatcaagtagcgggcgctgcagtgacgtcttcccatgtgagcagc
ggcagcatcagccggcgccgggtttcagctgccagcaggaccagctcttcgaagtcgcta
ggcggcgacgacggtgacgatcacgtcggagagtcgtcgtcggtgaaggccgcgaagctc
ccagtgccgtcgttccggcggctgttgaggctgaattccccggagtggaggcaagcggtt
ttggggagcatcagcgcgatagtgtttggtgcgatccaaccgttgtatgcgttctgcatg
ggaaatatgatcgccgtcttcttctcgagtgatcacgacgagatcaagtcgaggacgagg
acctacgcctttatcttcctctccctaacggtgttgtcgttcatcgtcaacgtcgggcag
cattacaacttcggcgccatgggggagtacctcaccaagcgggtgaggatgagcatgctc
tcgaagatcttgactttcgaagtcggttggttcgacgaagacgagaacgccaccggcgcc
gtttgcgctcgcttcgccaacgacgcaaatgtcgtgcgatcgttggtgggtgatagaatg
gctttgctgatccagacgacttcggcggtcgtcattgcctgcaccatggggctggtgatc
gcatggaggctggccgtcgtcatgatcgcagttcaacccatcatcatcatgtgcttctac
gcccgccgcgtcctcctcaagcggctgtcggcgaaagccatcaagtcccaggcggcgagc
agcaagctcgcatcggaggccgtaggcaacctccgcacgatcactgctttctcatcgcag
gggcgcatcctccgcatgttcaacgtggcccagcaaggaccccgccgggaaagcatacgc
cagtcgtggttcgctggtgccggcctctcgctatccaatggcctctcgatttgcatctgg
gcgctcgatttctggtacggcggcaagctcgtcgaccaaggccacctcggcgtgaaggcc
ctcttccagaccttcatgattctggtgagcaccggccgggtcatcgcggatgccggcagt
atgacgactgaccttgccaagggcgccgacgccgtcgcctccgtctttgctgtcctcgac
cgctacaccctcatcgagcccgacgaccaggatgcccaccggatcgctaagcttactggg
gagatcgacatctgcaaggttgatttcgcttacccggcgcgacctgacgtggtcatttgt
aggggtttctcgctctacatcgaggcgggcaagtcgacggcgttggtcggacagagcggc
tccgggaagtcaaccatcatcggcctgctcgaaagattctacgacccccttaaaggaaca
gtgaagatcgacgggaaggatatcaagtcctacaacctccggtcccttaggcgccacatt
ggtttggtgggtcaggagccgacactgttctccggcaccatccgcgagaacatcgcgtac
ggcgcagacggcgccaccgaggcggagatcgaagaggccgcgcgcgccgccaacgcgcat
gacttcatcagcgggctcaaggacgggtacgagacttactgcggtgaccgcgggacgcag
ctttccggcggtcagaaacagagggtcgccatcgcaagggcgatcctgaagaacccggcg
atcctgctgctggacgaggcgacgagcgcgttggacgggcagtcggagaagttggtgcag
gaggcgctggagaggatgatggtgggaaggacgagcgtggtggtggcgcacaggttgagc
accatcaggaattgtgacctcatcgcggtgctcgaccagggggtggtggtggagaaaggg
acgcatgcttcgctgctcgcaaaggaacgagcgtactataatctggttagccttcaacaa
ggcaacccagggccttga
DBGET
integrated database retrieval system
