Zygosaccharomyces rouxii: ZYRO0A09834g
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Entry
ZYRO0A09834g CDS
T01118
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ZYRO0A09834g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0A09834g
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0A09834g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ZYRO0A09834g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
ZYRO0A09834g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFIA_Pcf11
CID
AIF_C
Velvet
Motif
Other DBs
NCBI-GeneID:
8201762
NCBI-ProteinID:
XP_002494794
UniProt:
C5DQA0
LinkDB
All DBs
Position
A:complement(796638..798506)
Genome browser
AA seq
622 aa
AA seq
DB search
MDKEAEIVVKDFTSILEELTFNSRPIITTLTKIAEENIPCAQYFVDALEAKLERCPPKQK
LCAFYALDSICKNAGSPYTIYFSRNLFSLYRRTYLLVDNTTRTKLINMFKTWMVPNESTG
GYSPLFEKTALEKIEQFLIKASALHQKNFQSMLPTPTVPLLMREIDKLTALSTERLRAQP
QDEKLNMKLVVLSQLKQELQREKLTAGALKQLQMQLRQIFAQDQQTLQDRQRHQQQEQFV
QQQQQQLQQQQHQQQQQQHQNQNQNQQQNPLYGQSVIPLFGDSSNIGRGVSSLFGGPQSI
LSPLNFSEFDRQSKKTKLQELYQSLDEEGLVYKPPKESIVTLCSRLGADQNGLGTHQQQT
HKPLPPMDFLHGILADCKASFATVHVDILNTPNLQLSQQVISNENPIVNNCLVHLLYRAK
PNKCNVCGKRFGNDVEEKRLQAEHLDWHFRIHKRMKGSEGTVISGTGLGGTAAQKNIQSR
NWYLHDSQWVNFKDEEIVSTNRTTDESLTLANLDAQSTNAQSSVPVEEIKSPETVAVDES
ILRKKYVVVPELAEDMSFQCPICKDAVTGLYDEDLGEWVWKNSMEANGKYFHATCYYEAV
KNNSGSNVVQLDLEKLKHLVSG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggataaggaggctgaaatagtggttaaggattttaccagtatattggaggagttgacc
ttcaattcaaggcccataatcactacacttaccaagattgccgaggagaacattccttgt
gctcagtattttgtagatgccttagaggccaaactagaaagatgtccaccaaaacaaaag
ctttgtgcattttatgctctagattctatctgtaaaaatgctggtagtccctatacgatt
tattttagcagaaacttgttttcactttacaggaggacttatttacttgtggataataca
actagaactaaactaattaatatgtttaagacttggatggtacccaatgaatctactggt
gggtactcaccactttttgaaaaaacagcattggaaaagattgaacagtttctaataaag
gcaagtgcattacatcaaaagaatttccagtccatgttaccaacaccaactgtaccatta
ctcatgagagaaattgataaattgacagcattatctacagaacgtcttagagcacaaccg
caagatgagaagttaaatatgaaattagtggtcttgtctcagttaaagcaggaattacag
agggaaaaattgacagctggtgctctcaaacagttacagatgcagttgagacagattttt
gctcaagatcaacaaactttgcaagatagacaaaggcatcaacaacaggagcagttcgtt
cagcagcagcaacaacaactacagcagcagcagcatcaacagcagcagcagcagcatcag
aatcagaatcagaatcaacagcaaaacccactttatggtcaatcggtaattccgctattt
ggagatagttctaatattggtaggggtgtctcttctctttttggtggcccccagagcata
ttatcgcctttaaacttttcagaatttgataggcagagtaagaagaccaaattacaagag
ttatatcaatcactagatgaagaaggtttggtttataaacctcccaaagaatctattgta
acactttgttcaagattaggcgccgatcaaaatgggttgggaactcaccagcagcagacg
cacaagcccttgccgcccatggatttcttacacggtatcttagcagattgtaaggcatct
tttgctactgttcatgtggacattttaaatactccaaatttacaactctctcaacaagtg
atatccaacgagaatccgattgttaacaactgcttggttcatctcttatatagagcaaaa
cctaacaaatgcaacgtatgcggtaaaaggtttggtaatgacgttgaagagaagagatta
caggcggaacacttagattggcattttagaattcataaaagaatgaaaggatcagaaggt
acggttatttcaggaacaggtctggggggaacagcagcgcaaaagaatattcaatccaga
aattggtatttgcatgattcacaatgggtaaatttcaaagacgaagagattgtttccacc
aatcgtacaacagacgaaagtttaactctagcgaatttagatgcacaatcgactaatgca
caatcttcagtaccagtggaagaaatcaaatcaccagagaccgtggccgttgatgaaagt
attctacggaagaagtacgtcgtggttcctgaattagctgaagatatgtccttccagtgc
cccatctgtaaggatgctgtaacaggtctgtatgatgaagacttaggagaatgggtctgg
aaaaattcaatggaggcgaacggtaaatacttccatgcaacttgttattatgaagccgtt
aagaacaacagcggttctaacgtagtccaactagatttagaaaagttaaagcatctagta
agtggatga
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