Zygosaccharomyces rouxii: ZYRO0C07854g
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Entry
ZYRO0C07854g CDS
T01118
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ZYRO0C07854g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0C07854g
Enzymes [BR:
zro01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ZYRO0C07854g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
ZYRO0C07854g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_IV
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
8203196
NCBI-ProteinID:
XP_002495987
UniProt:
C5DTE3
LinkDB
All DBs
Position
C:595546..598380
Genome browser
AA seq
944 aa
AA seq
DB search
MSTKTDDQNKPHNFAPSPDFKWLCDELFVKIDNVQKQTRDHGAFKSLTVKYFEIISFFVK
LWRKTVGDNIYPALILILPYRDRRIFNIKDYTLIKAICSFLRLPANSVTEKRLLRWKRRA
GRGIKLSDFCVEEIRRRRSEPLNGERITIDKLNECLDQLAEERNTKGRGFKSLADSSVFK
YCLENMSFTEMKYYFDIILKSRVIGGQEHKFLNCWHPDARDYLSVVSDLKTVADKLWDPS
HRLKNDDLGVNLGLPFAPFLAKRLYISYDKVALRLKSDFYIEEKMDGERIQLHYMDYGRK
LKWFSRRGNDYTYLYGEDIGTGTVAKYLQLDPKVRECVLDGEMISFDTEENSVLPFGLVK
SSARDSLTAEGILTQGYRPLYMVIDFLYLNGVSLINVPLNTRKQYLSAILNPCPHAVEII
QSMHCYDDTSIKSSLEKAIMMGSEGIILKHFKSKYEIGARTDNWIKIKPEYLEQFGENLD
LLVIGRDPGKKDSLMCGLAVLEGDEEPGAQSDKQVVNLDSEEEEEPRKAVKKFISFCTIA
NGISQEEFKQIERKTAGKWKNTEDHKPPKILEFGSKLPEEWIYPEDSVVLEVKARSLDNT
ESSGRKFKVGCTLHGGYCRRIREDKNWTECYTLYELWQERRKKVPLSEDSNNQKPMKSKK
IRRPRIVSRLNQTLSCDDEAKTSSIFDGLIFYVISDYMASQDSERISKEQLCDLISGNGG
KLTFNVISDHRVKGGLRIISGKYTLECKALIERGYDILSPQWLMDCVNTGFLVTIEPRHC
FSVSEDMEKIARTRVDHFGDSYDVEITEDRLRDILTSKEFDSDFSTGSLDVISDVEDIPL
FLFSRRIVFIPEGFSYLDTQLLKHKVRLYGGQLTDNVNQCNLIIVPDGKINLRGRIISDL
RRLLSTFAAMTELPPAIPWIVIPAWIDRSIEENIQVPEEDFLAV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaaaactgatgatcaaaataaaccgcataattttgccccttcaccagatttt
aaatggttatgtgatgagctctttgtcaaaatagataatgttcagaagcagactagggac
catggcgcttttaaatctctaacggtgaaatattttgagataatttcattttttgtcaag
ttatggagaaagactgttggtgataacatttatccagcactaatcctgattttaccttat
agagatcgcagaatattcaatattaaggattacacgttaattaaggctatttgctctttt
ctaagattacccgctaattccgttacggaaaagagacttttaagatggaagagaagggct
ggaagaggtattaaattatctgacttttgcgtggaagaaattaggagacgtagaagtgaa
ccattgaatggagagaggattactattgataaattgaatgaatgtttggatcaattggca
gaggaaagaaacactaaaggtagagggtttaaaagtttagcagattcatcggttttcaaa
tactgtctggaaaatatgtcatttaccgagatgaaatattattttgacattatacttaaa
agtagagtaattggtggtcaagagcataaatttttaaattgttggcatccagatgctaga
gactatctaagtgttgtatctgacttgaaaacggtcgctgataagctttgggatccatct
caccgactgaaaaatgatgatttaggcgttaatcttgggttaccttttgcaccattttta
gccaaaaggctctacatatcttatgataaagttgcccttagattgaaaagcgatttttat
atcgaggagaagatggatggtgagaggattcaattacattacatggactatggtcgaaaa
ctgaaatggttcagcagacgtggcaatgattatacttatctctatggtgaggacattgga
accgggacggtcgctaaataccttcagttggatccaaaagttagagagtgcgtgttagat
ggagaaatgatctcatttgatactgaagaaaattcagtcctaccatttgggcttgtcaaa
agcagtgctcgtgattctttaaccgctgaaggtatacttactcaaggttaccgtccattg
tatatggtcattgattttctttacttgaacggtgtttctttgattaatgtgcctttgaat
actagaaaacagtatctatctgccattttaaatccgtgtcctcacgctgtggagataatc
caatcgatgcattgttacgacgatacttctataaagagctctcttgagaaagccataatg
atgggatcagagggaattatcttaaaacattttaaatctaagtatgaaatcggagcaaga
acagataactggattaaaattaagccggaatatttggagcaatttggtgagaatctcgac
ttgctagtcattggaagagaccctggtaagaaggattcacttatgtgcggcctggcagtc
ctagagggggatgaagaaccaggtgctcaatctgataagcaagttgttaatttggattct
gaggaagaagaggaacctcgaaaggccgtaaagaaatttatatctttttgcacaatagct
aatggtatttctcaagaagaatttaagcagatcgaaagaaaaacagccggtaaatggaaa
aacacagaagaccacaaaccaccaaaaatcttagagttcggttcaaaattgccagaagag
tggatctatcctgaagattctgttgtcctcgaagtgaaagccaggtctctggacaatact
gaatctagcggcaggaaatttaaagtgggttgtactttacatggtggatattgtaggaga
ataagagaggataagaattggacagaatgctacacgttatatgaattgtggcaggaaagg
aggaaaaaagtccccctttctgaggattcaaacaaccaaaagcctatgaagtctaagaag
attcgtaggcctcgaattgtatctcgattgaaccagacattatcttgtgatgatgaagca
aaaacttcgagtatattcgatggtctaatcttttacgtgatctctgactacatggcatct
caagattcggagagaataagcaaggaacaactttgtgatttaatttcagggaatggtggt
aaactaactttcaatgtcatttctgatcatcgcgtcaaaggtggcctccgaattatcagc
gggaaatatactttggaatgcaaggcactcatcgaacgagggtacgatattcttagtccc
caatggcttatggactgcgtcaatactggctttcttgtcacgatagaacctcgccattgc
ttcagcgtctcagaggatatggagaagatagcgaggacgagagtagatcatttcggtgac
agttacgatgttgaaattactgaggatcgtcttagagatattctcacgtcgaaagaattc
gactcagatttttccactggatctttagacgtgatttccgatgtggaggatatcccacta
tttttattttcaagaagaatagtgtttattccagaaggcttctcctacctggatacccag
ttattgaaacacaaagtaagactgtatggtgggcagttgactgacaatgtcaatcaatgt
aatttgatcatagtgccagatggtaagatcaatctgagaggtcgtatcataagtgattta
cgaaggcttctctcgacatttgccgccatgactgaattaccgcccgcaataccctggatt
gtcatcccagcatggatcgatagatccattgaagaaaacatccaagtaccagaggaggac
ttcctagctgtatag
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