Zymoseptoria tritici: MYCGRDRAFT_117814
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Entry
MYCGRDRAFT_117814 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_117814
03015 mRNA surveillance pathway
MYCGRDRAFT_117814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_117814
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MYCGRDRAFT_117814
mRNA cycle factors
P-body specific factors
MYCGRDRAFT_117814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
13402384
NCBI-ProteinID:
XP_003849587
JGI:
Mycgr3_117814
UniProt:
F9XKC7
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Position
9:complement(1877746..1879518)
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AA seq
573 aa
AA seq
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MPPKLLSKNGERGVLPVNTTTRAAPKAVAPRLKLEIRRLPPGLTLTEFEETLGDEWKLGN
GKVDWREYRQGKVKSGLGKFPEQSRCYIHLVNESMVKELDARFLAIVFHDKAGTYKHSDL
KHLPPTIGFAPIQRTPLNVKVRADNRQGTIDTDPEFIAFLEAETQPIVKPAAIDSVNVEK
DVTEKVKVKSTPLIDALREKKANKAKAAASKEDKKDGKGPAQKDSKEVVPTTEKDVKAGK
GQQQKVEQASKEAVKALNKQIASKQQPQQRPASPLQTNAKVASPAKGKKAVPPAKAQPAG
TTPAVAPAATIAAASTAQPSAPGRQRQRGNNTEGIKKMLQKDLGIKPKAIVQKPPATPAA
SQPTPAQANAKDKPAATQAAQSSAPAKAPTGPKAQSQPNAITSNHKAYLKHANPSQGMTE
ILIQQALAKHGDVVNVTIDPRKGTAIAIFKTVEAMKKALEAKKIPVGNGHVEVFEFKDRN
AGNNAVGGMVGGGGGGVGGGRGGFNGARGGGRGGRGVHSLDSGRYESRCAIMIEDHGPWE
RRISIAVCPKSAEPEAIRSLVPIICCRAQCDLK
NT seq
1723 nt
NT seq
+upstream
nt +downstream
nt
catgccgcccaaattgctctccaagaatggtgagcgaggcgtgctaccggtcaataccac
cacacgcgcagcaccgaaagcggtcgcaccacgtttgaagctggagatccgtcgattacc
accgggactcaccttgaccgaattcgaagagactttgggagatgagtggaaattgggaaa
tggcaaggtggattggagagagtaccgtcagggtaaagtgaagtcgggtttggggaaatt
ccccgagcagagcagatgctacatccatttggtgaacgagtcgatggtaaaagagctgga
cgcgcgcttcctcgccatagtcttccacgacaaggctggcacttacaagcactcggacct
caaacatctcccgcccactattgggttcgcacccattcaacgaactcctctcaacgtcaa
agtacgggcggacaatcgtcaaggcactatcgatacggatccggaattcatcgcctttct
cgaagcggagacacagccgattgtcaagccggccgcgattgacagtgtgaacgtggagaa
agatgtgacggagaaggtcaaggtcaagagcacgccgttgattgacgccctgcgggagaa
gaaggcgaacaaggcgaaggcagcggcgagcaaagaggacaaaaaggacggcaaaggacc
tgcccagaaggacagcaaagaggtggtccccactacggagaaggatgtcaaggccggtaa
aggacagcagcagaaggttgaacaagcatcaaaggaagccgtcaaggctttgaacaagca
aattgcttctaagcaacagccacaacagcggcctgcgtcgccgttgcagacgaatgcaaa
agttgccagtcccgcgaaagggaagaaagccgtcccgccggccaaagcacaacctgctgg
aacgacaccagctgtggctcctgcggcaactattgctgcagcaagtaccgcacagccttc
tgctcctgggcggcagcgtcaacgaggcaataacacggaagggatcaagaaaatgctgca
gaaagacctgggtatcaagccaaaagccattgtacagaaaccgccggcgacacccgcagc
ctcccaaccaacacctgcacaggcaaatgcaaaggacaagcccgcagcgactcaagccgc
ccaatcttcagcacctgcgaaagcgccaacaggcccgaaagctcagtcgcagccaaatgc
aatcacatcgaatcacaaagcctacctcaaacatgccaatcccagccagggcatgaccga
aatcctgatccagcaagcgctcgcgaagcacggtgacgtcgttaatgtcacgatcgatcc
tcgaaagggaactgcaattgcgatattcaagactgtggaagcgatgaagaaggcgctgga
agcgaagaagatacccgtagggaacggccatgttgaagtgttcgagttcaaggatcggaa
cgcgggcaataatgctgttggtgggatggttggtggcggtggaggtggagtgggaggagg
cagaggcggcttcaacggtgccagaggcggagggcgaggaggtcgtggagtccactccct
cgactccgggcgttacgaaagtcgatgcgcaatcatgatcgaggatcatgggccttggga
gaggcgaatatctatagcagtatgtccaaagtcagcagaacctgaggccattcgctctct
cgttcctatcatctgctgtcgtgcacagtgtgatctcaagtag
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