Zymoseptoria tritici: MYCGRDRAFT_69317
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Entry
MYCGRDRAFT_69317 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03022
Basal transcription factors
ztr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MYCGRDRAFT_69317
09124 Replication and repair
03420 Nucleotide excision repair
MYCGRDRAFT_69317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ztr03021
]
MYCGRDRAFT_69317
03400 DNA repair and recombination proteins [BR:
ztr03400
]
MYCGRDRAFT_69317
Transcription machinery [BR:
ztr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MYCGRDRAFT_69317
DNA repair and recombination proteins [BR:
ztr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MYCGRDRAFT_69317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
13395797
NCBI-ProteinID:
XP_003854611
JGI:
Mycgr3_69317
UniProt:
F9X6L5
LinkDB
All DBs
Position
3:complement(442407..444045)
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AA seq
493 aa
AA seq
DB search
MSSPSATTALDYLESLPGLTFAKLYAQPSTALAVFRRMLPHLAKTVVMSMLYLPGPMRAA
DLEAWFKSDVQSSQERERSVSVLVRLKVLVEEQAGGGAGLQYRLSEAFAKGLRCALTGAV
GKGDAGKGSFGVACSAEKDEDVNVKFLDDFARRQWEAILYYVVGSANSGLSGDLEISAGT
KRLLQQGNFVQIKSGGKQRLITQAGFTFLLEEVNAQVWSLAVVYLRVCEDLQMDPVDVLS
FLFTLGSLELGIPYSTSNLTLTQQHMLDDLQDFGLIYRSSPTATAYYPTRLATTLTSDAP
ALPNNTSSTTTTAATESNEKGYIILETNYRLYAYTSSPLQISILSLFSTLHTRYPNLITA
KITKSSIASAISQSITSDQIITYLSTHAHPVLRRQAAIMSAPILPPTVVDQIRLWQIEGE
RMTTWKGFYIRDVGGWEEYVKAVEYAEALGVLRQRFDAKRSFFVGRMDQMAGYFKLAAER
RRRERDGGGGANV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctccgtccgccaccaccgcgctcgactacctggagtccctccctggcctcact
ttcgccaagctctacgctcagccgtccacagcccttgccgttttccgccgcatgctgcct
catcttgcgaaaaccgtggtcatgtccatgctgtacctcccaggaccaatgcgcgccgcc
gatctcgaagcatggttcaaatcagatgtgcagagcagtcaggaaagagaaagaagtgtg
agcgtactggtgcggctgaaagtactggtggaagaacaagcaggcggaggcgcgggattg
cagtacaggctcagcgaggcattcgcaaaaggactgcgatgtgcgctgacgggcgcggtt
ggaaagggagatgctgggaagggaagctttggagtggcctgcagtgctgagaaagatgag
gatgtgaatgtgaaattcctggatgacttcgcacggaggcaatgggaggcgatactatac
tacgtagtgggatctgcaaacagcgggctgtcaggagacctggaaatctctgccggtacg
aagcgactactacaacaaggcaactttgtccaaatcaagagcggcggcaagcaacgcctc
atcacccaagccggcttcacattcctgctagaagaagtaaatgcacaagtctggagtctc
gcagtggtctacctccgagtctgcgaggatctccaaatggaccccgtcgacgtcctctcc
ttcctcttcaccctcggctcactcgaactcggaataccttacagcacatcaaatctcact
ctaacccaacaacacatgctcgacgacctgcaagacttcggcctaatctaccgctcttcc
cccactgcaacagcctactaccccacacggctcgccacaacccttacatccgatgcgccc
gccctgccaaacaacacctccagtaccaccacaaccgcagccacagaatccaacgaaaaa
ggctacatcatcctcgagaccaactaccgcctctacgcctacacctcctcccccctccaa
atctccatcctttccctcttctcgaccctccacacccgctacccaaacctcatcaccgcc
aaaatcacaaaatcctccatcgcctccgccatctcgcagtccatcacctccgaccaaatc
atcacctacctctccacgcacgcgcacccggtgctccgccggcaagcagccatcatgtcc
gcgcctatactaccgcccacagtggtggaccaaatccgactatggcagattgaaggggag
aggatgacgacttggaaggggttttatattcgggatgtaggcgggtgggaggagtatgta
aaagcggtcgagtatgcggaggcattgggtgttttgcgacagcgatttgatgcgaagcgg
agtttctttgtgggcaggatggatcaaatggcgggttatttcaaactggcggctgagcgg
agacggcgggaacgagatggtggtggtggtgcgaatgtgtga
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