Zymoseptoria tritici: MYCGRDRAFT_70063
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Entry
MYCGRDRAFT_70063 CDS
T02285
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03013
Nucleocytoplasmic transport
ztr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCGRDRAFT_70063
09122 Translation
03013 Nucleocytoplasmic transport
MYCGRDRAFT_70063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_70063
03041 Spliceosome [BR:
ztr03041
]
MYCGRDRAFT_70063
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MYCGRDRAFT_70063
Spliceosome [BR:
ztr03041
]
Complex C
Other components
EJC/TREX
MYCGRDRAFT_70063
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MYCGRDRAFT_70063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
13395534
NCBI-ProteinID:
XP_003854347
JGI:
Mycgr3_70063
UniProt:
F9X6Y5
LinkDB
All DBs
Position
3:complement(2224337..2226277)
Genome browser
AA seq
646 aa
AA seq
DB search
MAVEVASDLQVVAQIASRLQSLLRRASAVKPETSVEPALPTAEFVDDIEALLDDFAEHHD
QQYKFSAVETAVREVFYSLITSTSISDPAFVGVWNLLDIVLICGDRGRCDAALICLLLEE
LLDSQTTDGCRIVFDYLDSRRDRLAQKDFHKKNLIFLRSCNELLRRLSRAEDAIFCGRVF
FFLFQTFPLGDKSSVNLRGEFHVENTTKFDDSEVVPAEGNGEHMEIDSQPKEEPIKEHTP
APAVPTKPGSKAVPIKAPHKKIPEEEALPTSELYPIFWRLQHDFSDPTRLFDTAKFTAFK
KGLASTIVKFKKTPTVVQTKAGEEEKRGTKRKIGENGTVDDSSDHLMDNYNPKYLTSKDL
FDLELSDLAFQRHILVQALILIDFLLSLTDKAKKRLASLTTTNKSMLYSFALNEGDTQWA
TTTRSTITSYISSTAEGRQYCRMVETVLARDKNWVRWKVESCPSIVRGPVSTEQEMAARK
GAAQATRPRKIPEKPMGAMNLSFLDEGSGGGLEALKDPARYTAPTIEQLVDKVKTDKLDA
DFAADDEEKASFENAIQNAKWRALRQARSSNLSLLNKVESTKDLEEMPFVTAEDLEAEAE
TEAAEQNGDDAAVTNLTNAGERENTTVVDEVVADAPEEETAVTEAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgaagtcgcatcggatctgcaagtggtcgcacaaattgcttcgcgactgcaa
tctctgcttcggcgggccagcgcggtcaaaccagagacttccgtggagcctgcattaccc
accgccgagttcgtagatgacatcgaagcgctgctggatgattttgcggaacaccacgat
cagcagtacaagttctctgctgtcgaaactgccgtaagagaggtgttctactcattgatc
acgtctacgagcattagcgatccggctttcgtcggagtctggaatctcctggacattgtt
ctcatatgcggtgatcgcggcagatgcgacgctgctctcatttgtctgctgctggaggag
cttctggacagtcagacgaccgatggctgcaggattgtcttcgattatctcgattctcga
cgggatcgactggcacagaaggatttccacaagaagaatttgatcttcttgcgatcttgc
aatgaattgctgagacgattgagccgagctgaggatgcaattttctgcggtcgtgtcttt
ttcttcctattccagacattcccactgggcgacaagagctccgtgaatctgcgaggagaa
ttccacgtcgagaatacgacaaagtttgacgattccgaagtcgtcccggcagagggtaat
ggcgagcacatggagattgactcccagccaaaggaggaaccgatcaaagaacacacaccc
gcgcctgcagtgcccaccaagcctggaagcaaagccgtcccgatcaaggcgccacacaag
aagataccagaagaggaggcacttcctacaagcgagctgtatcccattttctggagactc
cagcatgacttctcggacccaactcgactattcgacacagcaaaattcacggcgttcaag
aaagggttggcaagtaccattgtcaagttcaagaaaacgccgacagtggtacaaacgaag
gccggtgaagaggagaagcgaggcacgaagcgaaagattggcgagaacggcaccgtcgat
gacagtagtgaccacctcatggataactacaacccgaagtacctcacgagcaaggatctg
tttgacctcgagttgagcgacctggccttccaacgccatatcctggtccaggcgttgatc
ctcatcgatttcctactatcattaaccgacaaagcgaagaagaggttggcttcgttgacg
acgacgaacaagtctatgctttattctttcgcgctgaatgaaggagacacgcaatgggcg
accacgacgcgatcgaccatcacttcttacatttcgtcgacggcagaagggcggcaatat
tgtcgtatggtcgagacagtccttgctcgggacaagaactgggttcgttggaaggttgaa
agctgcccctcgatcgtgcgaggtcctgtttcgactgagcaagagatggctgcaaggaaa
ggagccgcacaggcaactcgccctcgcaagatcccggagaaacctatgggcgccatgaat
ctgagcttcctagatgagggaagcggcggcggtttagaagcgttgaaagacccggcccgc
tacactgcgcccacgattgagcaactggtggacaaggtaaagaccgacaagctggacgca
gacttcgcagcagatgatgaagagaaagccagcttcgaaaatgcgattcagaatgccaaa
tggcgtgccctgcggcaagcacgatcgtcaaatctaagcttgttgaacaaggtggagagc
acgaaagaccttgaggagatgcccttcgtgactgccgaggacttggaagcagaggccgag
actgaagcagcggaacagaatggagatgatgccgcggtcactaatttgacgaacgcgggc
gagcgggagaacactacggtcgtcgacgaagttgtcgcagatgctcctgaggaggagacc
gcggtcacggaagcagcgtga
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