Zootoca vivipara (common lizard): 118079913
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Entry
118079913 CDS
T07275
Symbol
TRIM16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118079913 (TRIM16)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118079913 (TRIM16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
DUF2300
SOAR
Motif
Other DBs
NCBI-GeneID:
118079913
NCBI-ProteinID:
XP_034960554
LinkDB
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Position
LG2:34704088..34713755
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AA seq
612 aa
AA seq
DB search
MADSESSCPKELPREPTLEDSNHVANGSQICEEECESVGLKNEADPLSSDPERGGHTPSN
GVGLGENVTENGSKEEPPGKIGEGDVVEGEEVLCDFCLAEKVLAVKSCLTCMVNYCQDHL
KPHLENAKLQTHKLMDPMKDIDMQSCEVHKRHLGWFCHTDLVCVCEECLADGHQGHKAVT
CGVARKEKEYELIQLEAGYDWKLKSAENAIDKLQRNSESIVSSVSEVKALVEEKFEELLQ
AVKKTQSVVLAFLEEKERGAVNHANGIKIHLENKRVVMEECKSRLEKMATHTNDIIFLKE
YCEFKKSEGDDTLPSVYIGLKDKLSGIRRVVTESTEHILQLLQTSYKDKLQEFAKDEDAG
IKTMVSAMIPFKHRITAPEPKSRSDFLKYICPLTFDPVTAHRYLRLLEDNHKVTNTTPWE
HPYPDHPERFQHWRQVLSGKSLYISRYYFEVEIFGAGVYIGMTNKSIDRKGSESNSCISG
NDFSWCVKWNGKEFSAWHSDVETPLKVQGFSRIGVYLDYPRGTLSFYGIASDVMTLLHKF
ECKFTEPLYPAFWLSKKENSVQIVKLWDEAAATLVPLPGHLGEAASSSTALAPESEAEAS
TKTSVGTQPLIK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctgaatccagctgtcccaaagaactgcctcgagaaccgacacttgaagac
tccaaccatgtggcaaatgggtcacagatctgcgaggaagagtgtgagagcgtaggactg
aaaaatgaagcggaccctctgtcatcggatccagaaagaggaggacacactcccagcaac
ggagtaggcctgggagagaatgtgactgaaaatggatccaaagaggagccaccaggcaag
attggggaaggggacgtggtagagggagaagaggtcctctgtgacttctgcttggctgag
aaggtgctggcagtgaagtcctgcttgacctgcatggtaaactattgccaggatcacttg
aagcctcacttggagaacgccaaactccagacccataagcttatggatccaatgaaggac
attgacatgcagagctgcgaagtccacaagaggcaccttggttggttctgccatactgac
cttgtgtgtgtctgtgaggagtgccttgcagatggacaccaggggcacaaggctgtcacc
tgtggggtagccaggaaggaaaaggagtacgaacttattcagctcgaagcaggctatgac
tggaaactgaagtcagcagaaaatgcaattgataagctgcagagaaattcagagtctata
gtgagttccgtatctgaagtgaaagccttggtggaagagaagtttgaggagctgctccaa
gcagtgaagaagactcagtctgttgtgctagctttcctagaggagaaggagcgtggtgcc
gttaatcatgctaatgggataaagatccaccttgagaacaagcgggtggtgatggaggaa
tgcaagagcaggctggagaagatggccacacacacaaatgacatcatctttctgaaggaa
tactgtgaattcaagaagagcgaaggagacgacacgttgcccagtgtctacattggccta
aaagacaaattgtcagggatccgaagggtggtcacagagtccacagaacatattttacaa
cttttacaaacttcctataaggacaagttgcaggagtttgctaaagatgaggatgccggc
atcaagacaatggtgtccgccatgatcccattcaagcaccgcataacggccccagaacct
aaaagcaggagtgacttcttgaaatatatttgcccattgacctttgacccggttactgct
catcgctatttgaggctcctggaagacaaccacaaagtcaccaacaccacaccgtgggag
cacccgtacccggatcacccagagagatttcagcactggcgccaggtgctgtcgggcaaa
agcttatacatcagccgctactactttgaggtcgagatatttggggctggggtttacatt
ggcatgacaaacaagagcattgaccggaaagggtcagaaagcaacagctgcatctcgggg
aatgacttctcctggtgtgttaagtggaatgggaaggagttctccgcttggcatagtgat
gtggagacacccttgaaagtccagggatttagcaggataggagtttacctggattacccc
aggggcaccctctccttttacggcattgcttcggatgtcatgactctcttgcataagttc
gagtgcaagtttaccgaacctctctacccagccttctggctatccaagaaggagaacagt
gtgcagattgtcaagttgtgggatgaggctgcggccaccctagtacctcttcctggtcac
ttgggagaagcagcttcttccagcacagccttggcacctgagagcgaagcagaggcaagc
acaaaaacatcagtcgggacgcagccattgattaagtga
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