Zootoca vivipara (common lizard): 118080485
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Entry
118080485 CDS
T07275
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118080485 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
118080485 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118080485 (THOC3)
03041 Spliceosome [BR:
zvi03041
]
118080485 (THOC3)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118080485 (THOC3)
Spliceosome [BR:
zvi03041
]
Complex C
Other components
EJC/TREX
118080485 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118080485 (THOC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
RMC1_N
PD40
Coatomer_WDAD
Nup160
Peptidase_S9_N
Me-amine-dh_H
PROPPIN
Cytochrom_D1
YNCE
Motif
Other DBs
NCBI-GeneID:
118080485
NCBI-ProteinID:
XP_034961683
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All DBs
Position
LG2:complement(63262534..63269057)
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AA seq
323 aa
AA seq
DB search
MALSPYVQSMQELFRANTRIREFPAHVAKVHSVAWSCCGRRLASGSFDKTASVFVLDKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIASVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTYRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESSTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccccgtacgtgcagtctatgcaggagctgttccgggccaacacgcgcatc
cgcgagttccccgcgcacgtggccaaggtccactcggtggcttggagctgctgcggccgc
cgcctcgcttccggctccttcgacaagaccgccagcgtcttcgtgctcgacaaggaccgg
ctggtgaaggagaataattaccgtggccatggagacagtgtggaccagttgtgctggcac
cccagtaacccggacttatttgtcactgcatctggagacaaaaccatccgtatatgggat
gttcgcactacaaaatgtattgcctcagtgaataccaagggagagaatattaacatttgt
tggagccccgacggacagactattgcagtagggaacaaggatgatgtggtcactttcatt
gatgctaaaacatatcggtccaaagctgaggaacagttcaagtttgaggtgaatgagatc
tcttggaacaatgacaacaacatgttcttcctcaccaatggcaacggttgcatcaacatc
ctcagctacccagagctgaagctcatccagtcaattaatgcccatccttcaaactgcatc
tgtataaaatttgacccaacgggcaagtattttgctacaggaagtgctgatgcattggtt
agcctctgggatgtggatgagcttgtatgcgtgcgatgcttttctaggctcgactggcct
gtgaggacattgagtttcagccatgatgggaagatgctggcttcagcctctgaagatcac
ttcattgacattgctgaggtagaaacaggcgagaaactgtgggaagtgcagtgcgagtct
tcaacgttcactgtggcttggcatccaaaacggcccctgttggccttcgcctgcgatgac
aaagatggcaaatatgatagcagcagagaagctggaactgtgaagctctttggtcttccc
aatgactcataa
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integrated database retrieval system
