Zootoca vivipara (common lizard): 118081070
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Entry
118081070 CDS
T07275
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03022
Basal transcription factors
zvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118081070 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
118081070 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118081070 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118081070 (GTF2H4)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118081070 (GTF2H4)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118081070 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
118081070
NCBI-ProteinID:
XP_034963109
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All DBs
Position
LG2:complement(107187237..107201401)
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AA seq
460 aa
AA seq
DB search
MESMMKLQRVQLKCKNLHEFLRGLSPGILDRLYNHPATCLAVFRELPGLAKNYVMRMLFL
EQPLPQAAVASWVKKEFTKEQDESSDVLLGLRLWHTQVLPGGLQGIVLNPIFKENLRIAL
LGGGKAWSDDTGQLGPDKHARDVPSLDKYAEERWEVILHFMVGSPSAAVSQDLAQLLIEA
GLMKSSEPGEPPCITSSGFQFLLLDTSSQLWYFMLQYLQSAETRGMDLVEILSFLFQLSF
STLGKDYSVEGMSESLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGISGTTVDTH
YQGFIIVETNYRIYAYTDSELQIALIALFSEMLYRFPNLVVAQVTRESVQQAIANGITAD
QIIHFLRTRAHSVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFELLR
NHAKELGVLVFENPAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaatgatgaaattgcagagggtacagctgaaatgcaagaaccttcatgaattc
ctgcggggcctcagccctggcatcttagaccggctctacaaccatcctgccacatgccta
gctgtctttcgggagctgccggggttggccaagaactacgtcatgaggatgcttttcctg
gaacagcccctccctcaggccgctgtggcatcgtgggtcaagaaggaattcaccaaggag
caggatgaaagctcggatgttttgctggggttgcggctctggcacacgcaggtgctcccc
ggcggcctccaaggaatcgtcttgaaccccatctttaaggagaacctgcgcatcgccttg
ctgggaggaggcaaggcctggtctgatgacactggccagctgggccccgacaagcacgcc
cgggatgtcccttctcttgacaagtacgccgaggagaggtgggaggtcatcctgcatttc
atggtgggctctccaagtgcagccgtgagccaggacttagctcagctactcattgaagct
ggactgatgaagagttctgaacctggggagcccccctgcatcacatcttccggcttccag
ttcctgttgctggatacctcatctcagctctggtatttcatgctgcaatatctccagtca
gctgagacccggggcatggatctggtggagattctttcctttctcttccagcttagcttc
tccactctcggcaaggactattccgtggaagggatgagcgagtctctgctgaatttcctc
cagcaccttcgggaatttggcctcgtctttcagagaaagaggaaatctcgccgttactac
ccaacacggctggccatcaacctctcctccggcatctcgggcaccacagtggacacccat
taccagggcttcataattgtggagaccaactacaggatctatgcctacacagattctgaa
ctacagattgcgctcatcgccctcttttccgagatgctctaccgcttccccaacttggtg
gtggcccaagtcacccgggagagtgtgcagcaagccatcgccaatggcatcacagcagac
cagatcattcatttcctacgtaccagagcccactctgtgatgctgaaacagaccccggtg
cttcctcccaccatcacagatcagatccggctgtgggagctggaacgagacagactccgc
ttctctgagggtgtcctctacaaccagttcctgtcccaggttgacttcgagcttctgcgc
aaccacgcgaaggaactcggggtccttgtcttcgagaacccggccaaacgtctcatggtg
gtgacgcccgccggccactcagatgtcaagcgcttctggaagcggcagaaacacagttcc
tga
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